Leucoraja erinacea (little skate): 129706173
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Entry
129706173 CDS
T09122
Symbol
scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129706173 (scube1)
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
129706173 (scube1)
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Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
CUB
EGF
hEGF
DUF5398
Motif
Other DBs
NCBI-GeneID:
129706173
NCBI-ProteinID:
XP_055506192
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All DBs
Position
19:complement(7741296..7930632)
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AA seq
1017 aa
AA seq
DB search
MGTVCFSWHFCLFFVLLNTCRSLGTSGLVDLDECAVGTDDCHIDAICQNTPKSYKCICKP
GYKGDGKQCEDVDECDNDYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCMDVNECDDN
NGGCQQICVNTMGSYECQCKEGFFLSDNQHTCIHRSNEGMNCMNKDHGCAHICRETPKGG
VACECRPGFELAKNQRDCTLTCNYGNGGCQHTCDDMDSGPVCGCHQKYALHSDGKTCIEE
DEAAIESSEFNTMSVTDVDKRVKRRLHMETCAVNNGGCDRTCKDTATGVRCSCPVGFTLQ
PDGKTCKDIDECLINNGGCDHFCRNTVGSFECSCRKGHKLLTDERSCQDIDECSFERTCD
HICINYPGSFECLCQKGYTLYGLTHCGDIDECSINNGSCDFGCLNTMGSYECVCPPGKKL
HWNKKDCAETVKCFRNAKAARKVQLICSKSGGVESCSLSCPSKALFVADSENSYSFSCGV
PLQPTKSAQRRNATLPSCADPLAPPIKQKARFKIKDAKCHLRPRIKERIKDSLKQSISGG
HFPCTDNCHVTFVNLKCDSSKKRRRGRKSPSKEVSHITAEFEVEMKSEQVTDSCNMECVR
KRMEQKLQTAIKTLRKSINKQQFYIQFSGTEYEVAQKPAKMHENQAVCSTGQVLQDGKCI
SCEAGRYYSGEVNQCLPCAPGTYQDMKGQLSCEPCPSNDGQGMAGAHNMSECGGQCSAGH
FSSDGFRPCRSCPTGTFQPEAGRTQCFYCGGGLLTKYEGAVSFQDCETRVHCSPGHYYNS
TTHRCIRCPVATYQPEFGQNYCITCPGNTTTDVDGSTNVTQCKNQQCGGDLGDYMGFIES
PNYPGDYPSNVECVWNINPPPKRRILIVVPEIFLPMEDECGDVLVMRKSSSPTSVTTYET
CQTYERPIAFTSRSRKLWIQFKANEGNSAKGFQVPYVTYDEDYQQLIEDIVRDGRLYASE
NHQEILKDKKLIKALFDVLAHPQNYFKYTAQESKEMFPRSFIKLLRSKVSRFLRPYK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgtttgtttttcatggcacttctgtttgtttttcgtcctgttaaatacttgc
cgttccttgggaactagtgggcttgtagatctcgatgagtgcgctgtcgggaccgatgat
tgtcacatcgatgccatctgccaaaatacacccaagtcctacaaatgcatctgcaagcct
ggctacaaaggagacggaaaacaatgtgaagacgtcgatgaatgcgacaacgactacaac
ggtggctgcgttcacgaatgcatcaacatccccggcaactacaggtgcacgtgttacgat
ggcttcatgttggcgcacgacggtcacaattgcatggacgtgaatgaatgtgatgacaat
aacgggggctgccaacaaatctgtgttaacaccatgggcagctatgagtgtcagtgtaaa
gagggattcttcctgagtgataaccaacacacctgcatacaccgttcaaatgaggggatg
aactgcatgaacaaggatcacgggtgcgcgcacatctgccgagagactcccaaggggggt
gtggcctgtgaatgcaggcctggctttgaactcgccaaaaaccagagggactgcacatta
acctgtaactacggaaacgggggctgccaacatacgtgcgatgacatggacagcggacct
gtgtgcggctgccaccagaagtacgcccttcactctgacgggaagacgtgcatcgaggag
gatgaggctgcaattgagagctcagagttcaataccatgtcagtaactgatgtggacaag
cgggtgaaacggcgactacatatggaaacgtgcgccgtgaacaacggaggctgcgaccgt
acgtgcaaagataccgccacgggggtccggtgtagctgtccggttggattcaccctgcaa
cccgatgggaaaacgtgcaaagatattgatgagtgtttaataaacaacgggggttgtgac
catttctgcagaaacacagtcggcagctttgagtgcagctgtcggaaaggccacaagctc
ctgacagatgaacgatcttgccaagatatcgatgagtgttccttcgaaagaacctgtgac
cacatatgcatcaactacccaggaagcttcgaatgcctgtgtcagaaaggctatactttg
tacggactaacccattgtggagatatcgatgaatgcagcatcaataatggcagctgtgat
tttggttgtctgaacaccatgggaagttatgagtgtgtttgccctcctgggaagaagctg
cattggaacaagaaagattgtgctgagacggtgaaatgtttccggaacgcaaaggcggca
cggaaagtccagctgatctgcagtaagagcggaggagtcgagagctgctccctgtcttgc
ccgtcgaaagcactctttgtggcagattctgaaaacagctactctttcagctgtggagtt
ccgttgcagccgaccaaatctgcacagaggcgaaatgcaactctgcccagctgtgcagac
cctttggcacctccaataaagcaaaaagctcgattcaagatcaaagacgccaaatgccat
cttcgtccacgaattaaggaacggattaaggatagtttgaagcaaagcatatcgggagga
catttcccgtgcacggacaactgccacgtgacttttgtcaacctgaagtgcgattcttcc
aagaagaggcggcggggacgcaagtcaccgtccaaggaggtgtcgcacatcacagccgaa
ttcgaggtggagatgaagtccgagcaggtgacagactcctgcaacatggaatgcgtgcgc
aagaggatggagcaaaagctgcagactgcaatcaaaacactaaggaagtcaatcaacaag
cagcaattttacattcagttctccgggacagaatacgaagtggctcagaaaccggcgaag
atgcacgagaaccaagcggtgtgcagcacggggcaggtgctgcaggatggcaaatgcatc
agctgtgaagccggacgttactacagtggagaggtgaaccagtgcctgccatgtgcaccg
ggcacctaccaggacatgaaggggcagctgtcctgcgaaccttgtcccagcaacgacggg
caaggcatggccggagcacacaacatgtcagagtgcggaggccagtgctcggcgggacat
ttctcctcggacgggtttcgcccgtgtcgctcgtgcccgaccggcaccttccagcccgag
gccggacgcacccagtgcttctactgcggcggcgggttgctgaccaagtacgagggcgcc
gtctccttccaagattgcgaaacgagagttcattgctcccctggtcactattacaactcc
accacacacagatgcataagatgcccagttgcaacttatcagccagagtttggccagaat
tactgcattacctgccctggaaacaccaccacggatgttgacggctccaccaacgttacc
cagtgtaaaaaccagcagtgcggcggagatctcggagattacatgggcttcattgagtca
ccaaactatcctggagattatccctcgaacgtggagtgcgtttggaacataaaccctcca
ccaaagagaaggatcctgattgtggtgccagagatattcttaccgatggaagacgagtgc
ggagacgtgttggtgatgagaaagagttcctcaccaacatccgtcaccacctatgaaacg
tgccagacctacgaacggccgattgcattcacctcaaggtctcggaaactatggattcag
ttcaaagccaacgaagggaacagtgccaaaggatttcaagttccatacgtcacgtacgat
gaggactaccagcagctaatagaagacatcgtcagggacggacggttgtacgcttcggag
aatcaccaagaaatccttaaagacaagaagttaatcaaagcgctctttgatgtgttggct
caccctcaaaactacttcaaatacacggcgcaagaatcaaaggaaatgttccccagatca
tttataaagttgctgcggtccaaggtttccaggtttttgaggccttacaagtag
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