Leucoraja erinacea (little skate): 129710363
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Entry
129710363 CDS
T09122
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129710363 (ubtf)
03021 Transcription machinery [BR:
leri03021
]
129710363 (ubtf)
Transcription factors [BR:
leri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
129710363 (ubtf)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
129710363 (ubtf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
Protamine_like
DUF4872
DUF4473
Motif
Other DBs
NCBI-GeneID:
129710363
NCBI-ProteinID:
XP_055513284
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Position
27:complement(24715033..24763329)
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AA seq
760 aa
AA seq
DB search
MNGETAMAETTELNTAKEDWTKEDVLGLLDCMRSIVPSNDVLKFKTTESHMDWNKVTFAH
YTGEMCKRKWSEISHEVRKFRTLSELILDVQENVKNPYKGKKLKNHPDFPKKPLTPYFRF
FMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQEFQKEKEDFEQNMARFRED
HPDLLESVKRTDAPEKPKTPQQLWYLHEKKAFMKLHPKATMKDVKEALGKQWSQLSDKKR
LKWIGKSLEQRELYEDAMRDYVLRHPEQSISLDDLTKNTLTKAERQLKDKFDGRPTKPPP
NGYSLYCAELMSNMKDIPSTERMVLCSKQWKMLSQKEKDAYQKRCEQKKKEYEINLHRFL
LSLPEHEQQRVLSEEKMIGIHKKASNLKQNAVKGITISPSDANKTTPDKPKRPISAMFIF
SEEKRKKLQEDEPELSESELTRKLARIWTELSEKKKEKYRRLEAAAKADSEQKRQGFGKG
KGTAIRGKLPEPPKTAEEIWQQNVIGDYLAKYRNDRIKAIKAMEATWSAMEKKEKLMWIK
KAAEDQKRYEKELSEIRAPATNVNRKIKFEGEPKKPPMNGYQKFSQELLTGGELNHLNLK
DRMVEIGKRWRKVSQAQKDRYKKMAEEQQCQYKIILEAWLKSISPQERAAYKEYTSNKRR
GTAKVSTPNPKMKIAIPAQNASETDDSDDDDDDDDDDEDDEEKANSSDSDDSSGSDSDEE
SEEDDADGNADEEEDEEGDENQSDSSSSSSSEESSDSDSD
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgagacagctatggctgaaacgaccgaattgaacactgcaaaagaagattgg
acaaaagaggatgtcttgggccttctggattgcatgagaagcattgtcccttctaatgac
gtgctgaagttcaaaacaacagagtcacacatggactggaataaggtgaccttcgcccat
tatacaggggaaatgtgtaaacggaagtggtcggagatttcgcatgaggtgagaaagttc
cgcactttatcggaactgatactggatgtccaagagaacgtgaagaatccttataaaggg
aagaaactcaagaatcatcccgattttcccaagaagcctctcacgccttactttcgattc
tttatggagaaaagagcaaaatacgcaaaacttcatcctgaaatgagcaacttggatctg
actaaaattctgtccaagaaatacaaggaattgccggaaaagaaaaagatgaaatatatt
caggagtttcagaaggagaaagaagattttgaacagaacatggcccgtttcagagaggac
cacccggatctgctggagagcgtaaagaggacagatgccccagaaaaacccaaaactcct
cagcagctgtggtatcttcacgaaaagaaggccttcatgaagttgcatccaaaggcaaca
atgaaggatgtcaaagaagcactggggaagcagtggtcccagctgtctgacaagaaaaga
ctcaagtggattggcaaaagcttagagcagagagaactttacgaggatgctatgcgagat
tatgttctacgccaccctgaacaaagcatcagtctggacgatttgaccaaaaatactctg
accaaagctgaacgacagctcaaggacaagtttgatggtcgacccacaaaaccaccacca
aatggctattctctttattgtgctgaactgatgtccaatatgaaagatattcccagcaca
gaacgcatggttctgtgtagcaagcagtggaagatgttgtcccaaaaagagaaggatgcg
tatcaaaaacgatgcgaacaaaaaaagaaggaatacgaaattaatcttcatcggtttttg
ctgagcctcccggaacatgagcaacaaagggtcctgtctgaggaaaagatgattggaata
cacaaaaaagcaagcaacttgaagcagaatgcagttaaaggcatcaccatatccccttca
gatgccaacaagactactcctgacaaaccaaagcgtccgatctctgccatgttcattttc
tcggaagagaagcgcaagaagttgcaggaggacgagccagagctgtcggagagtgaactg
acaagaaaactggccaggatatggactgagctatctgagaagaaaaaggaaaagtaccgt
cgcctggaggcagcggcaaaagccgactcggagcagaaaaggcagggttttggcaaagga
aaaggcactgctatccgtgggaaactgccagagccacccaagactgcagaagagatctgg
cagcagaatgtcattggcgattacctggccaagtacaggaatgatcgcattaaggctata
aaagcgatggaggcaacttggagtgcgatggagaaaaaggagaaattaatgtggattaaa
aaggcggctgaggatcaaaagcgatatgagaaagaactaagtgaaatacgagcaccagca
acaaacgtgaacaggaaaatcaaatttgagggagaacctaaaaaaccaccaatgaatggc
tatcagaaattttcccaggaattactgacaggcggtgaactgaaccacttgaatctcaaa
gaccggatggtggagattgggaaaagatggcggaaggtctctcaggctcaaaaggaccgt
tacaagaagatggcagaagaacaacaatgtcaatacaaaataattctcgaggcctggctt
aagagcatatcgccccaagagagagctgcatacaaggagtacacttcaaataaacgcaga
ggtactgcaaaagtatccactccaaatcccaaaatgaaaattgcaataccagcacagaat
gcaagtgaaacggacgattctgatgatgacgatgatgatgacgatgatgacgaggatgat
gaagagaaagccaattcttcagattctgatgattcctcgggctctgacagtgatgaggag
agtgaagaggatgatgcggacgggaatgcagacgaagaggaggatgaagagggagatgaa
aaccagtccgacagcagcagtagttcttcgtctgaagagtcctctgactcggactctgac
tga
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