Leucoraja erinacea (little skate): 129710891
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Entry
129710891 CDS
T09122
Symbol
synrg
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129710891 (synrg)
Membrane trafficking [BR:
leri04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
129710891 (synrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF463
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
129710891
NCBI-ProteinID:
XP_055514182
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All DBs
Position
28:complement(32240628..32364387)
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AA seq
1414 aa
AA seq
DB search
MASRPGSGGGAGGGRGFMFPVSGGLIPPQGMTPMQHQQQQQQGFPMVPVMQANMQGIIGM
NFSSQMPAGSMPMQGGMPMGTMPPAGMPYMPQHHYMAMRPSPPQYTPDMQKQFAEEQQKR
FEQQQKMMEEERKRRQFEEQKQKLRLLSSVKPKIGEKNRDDALEAIKGNLAGFTRDAKMH
PGPAPHSSKQDTPQSSLSTAPPSQSPAFSDDEEFSDFVQGPDSAAPAAPTSFQQFQPFCP
TLESGLQSELAAAPAQHGSSHHPKASTALYATAGHSAKHSQGLSLEEKMFASCDFSMPKQ
AHIKFNKSEPKAHFGSKASVSTQFQPSAKACNWGIQSESLSGVFTADMPKEPEPESPAKE
SGVGVYPPQDTLQPMLPPWLFNDNLVPELYRKVLEVTLSPVGIETAKLYPILLSSGLPRE
MLGQIWALANRATPGKLTKEELYTVLAMVAMSQRGIPTLNLENLNQFSSAPLPTLNAMAM
TSVPQQPMLSMASGASLSVQAGMDLPTPLGGSAVPVSSSFMTSFPVSQAVKSDDDDFQDF
QEAPKHNATDDSFKGFKSEASGILSKAPGSQTAVSAHTLLTPISGTSASSSVDKYAVFKD
LTEDKPAESSPFADFGDKYSVFRDLGQSMESKASGEGFAEFKSPGNDDGFTDFKTADSIS
PVDSSEQAKTFTTAFPSVPFLPQPPPVTQPKDTFSLTDLFNSVSSSGENKSVSFPSVSVT
SSITSSVCVAPSLPSSHSSGTISSSGSRTVGGIDDFGDFSLFGIASSTTAGGEWDQDEFA
DFIAFGTTGSYEQKSKDKYDIFRQEKNDGFTTSFDASLGIAEQPPASTVDKYDVFKQLPE
EGSVMGFEEQKDSTSLSQGKNDDDFPITKLPLAFGTSDKVFMDKLSAFKQAKEDSASVKS
LDLPSIGGSSIGKEDSEDALSAQFDMKSAEVGGDLKHVLSDSSLDLPPVIGQPPPVTDLD
DFKFDPFGTFSNGSAVSSLTSYDWSEKEDSGTHIKKQPPFFNSEGRSLSSTSVLQKKETS
FGSSENITMMTVSTVTTFSAEDANSQHKFDAFGDFKETAEQTKQKKQSGNDFGDFAITSL
REREREITEPHLAEPTSGDAERGTEVQVTNGVSSEETKTESFDEFGEFQSEKPKISKFDF
LMASSQGKIKSSEEMIKSEMETFDLSVQGSHKRSLSLGDKEVTRLAAPSEQAFRDRSNTL
NEKPAAPLPVIRDKYKDLTGEVEENERYAYEWQRCLESALQVINKASETLNGISSSTVCT
EVIQSTQGMEYLLGVIEVYRVTKRVELGIKATAVCNEKLQLLMKEIENIWSSLTIFMSLT
PLTPDENSLDFSSCILRPGIKNAKELACGVCLLNVNSRSKKEENLEDHPKQAFNSESDNF
KLSYGGHQYHASCANFWINCVEPKPPGLILPDLL
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgaccaggatcaggcggcggcgctggaggcggcagaggcttcatgttccca
gtatcagggggattaattcctccccaagggatgacaccaatgcagcatcagcagcagcag
cagcagggattccccatggtacctgtgatgcaggctaacatgcaaggcataataggaatg
aacttcagttcacagatgcctgctggatcaatgcctatgcagggtggaatgccgatgggt
accatgccaccagcgggaatgccatatatgccacaacatcattacatggcaatgcggcca
tcaccgccacagtacacaccggatatgcaaaaacagtttgctgaagagcaacaaaaacga
tttgaacagcaacaaaagatgatggaagaggaacggaaacggcgacagttcgaagagcaa
aagcagaagcttcgccttctgagcagtgtgaaaccgaagattggggaaaaaaacagagat
gatgctttggaagccattaaaggaaaccttgctgggttcacaagggatgcaaagatgcac
ccaggccctgctccacattccagtaaacaagatactccccagtcatccctatcaactgcc
cctccttcccaatcccctgctttttctgacgatgaagaattcagtgactttgttcaaggg
cctgattctgctgcacctgcggctcccaccagtttccagcagttccaacccttctgcccc
acgttagagtctgggctgcagtctgagctggctgcagctccggcccaacatggtagctca
caccaccctaaagcttctactgcattgtatgccacagcagggcattcagcaaaacacagc
caaggcctttcattagaagagaaaatgtttgcttcctgtgatttcagcatgcccaaacag
gcacacattaaatttaacaagtctgagcccaaggcccactttgggtctaaagcctcagtc
tcgactcagtttcagcccagtgccaaggcctgtaactggggcatccagtctgaaagtctc
agtggtgtcttcacagcagacatgccaaaggaacctgagccagagtcacctgccaaagag
agtggtgtcggtgtgtaccctccacaggatacgcttcaacccatgcttcctccatggctg
ttcaatgacaatcttgtcccagaactctacaggaaagttcttgaagtcactctctcccct
gtgggtattgagacagcaaaactttatccaattcttctgtcatcgggattacccagagag
atgctgggccaaatatgggctcttgctaatcgcgcaactcctggcaaactaacgaaagag
gaactgtatacagtattggctatggtagccatgtctcagaggggcattcctacattgaat
cttgaaaatctcaaccagttttcatcggctcctcttcctacgctaaatgcaatggcgatg
acttcagttccacagcaacccatgctttccatggcttcgggtgcaagtctgtctgttcaa
gcaggaatggatcttcccacgccactgggtggtagtgctgtcccagtttccagtagcttt
atgacatcatttcctgtcagtcaggctgttaaatctgatgatgatgacttccaggatttt
caggaggctcctaaacacaatgcaactgatgattcattcaagggattcaagagtgaagcc
tctggaattttatcgaaagccccaggctcacaaactgcagtcagtgcgcacactttactg
acaccaatttcaggcacctctgcttcatcatctgtggataaatatgcagtctttaaagac
ttgacagaagacaagcctgctgaaagttcaccatttgcagattttggcgataaatacagt
gtgtttcgggaccttggtcagagcatggagagtaaagcctcaggggagggctttgcagaa
ttcaagtcaccaggaaatgatgacggattcactgacttcaaaacagcagacagcatttca
ccagtagattcttcagagcaagcaaagacattcacaacggcctttccttccgtgcccttt
cttccacaaccaccacctgtaacacaacctaaagacactttcagtctcacggaccttttt
aactctgtcagttcatctggagagaacaaatctgtatcatttccatcagtttctgtgacc
tcatccattacatcatctgtgtgtgtcgcaccatcattaccatcatcacattcatccggt
actatttcctcatctggtagcaggactgttggcggaattgatgactttggggacttcagt
ctttttggcattgcatccagtactactgcaggtggggaatgggatcaggatgaatttgca
gattttattgcttttggcactactggatcctacgaacagaaatcaaaggataagtacgat
attttcaggcaggagaagaatgatggcttcacaacatcttttgatgcctcacttggcata
gcagagcagcctccagcctcaactgtagacaaatatgatgtctttaaacaattacctgag
gaagggtctgtgatgggctttgaggagcaaaaagacagtacctctctttcacaagggaag
aatgatgatgactttccaattaccaagttgccccttgcatttggcacctccgataaggtt
ttcatggataaactttctgcttttaagcaagcaaaagaggactctgcttctgtgaaatct
ttggaccttccttctattggtgggagcagtattggtaaagaggactcagaagatgcctta
tctgctcagtttgacatgaagtcagctgaggttggtggtgatttgaagcatgtattgtca
gacagctcgctggatttaccacctgtcattggtcagccacctccggttacagatctcgat
gactttaagtttgacccatttggtacctttagcaatggctctgcagtcagcagtttaact
agctatgattggtctgagaaagaagactcaggcacccacattaagaagcagccaccattc
tttaattccgagggcaggtccttatcctccacctctgtgcttcagaagaaagaaacttct
tttggcagctctgaaaacatcactatgatgactgtctccacggtaacaacattctcagct
gaagatgcaaattcccaacacaagtttgatgccttcggagacttcaaagagacagcagaa
cagaccaaacagaaaaaacaaagtggtaacgactttggagactttgcaattacttctttg
agggaaagggagagagagattacagagcctcatttggccgaaccaacttctggagatgca
gagcgagggactgaagtccaagtgacaaatggggtttcctccgaagaaacgaagacagaa
tcctttgatgaatttggggaatttcaaagtgaaaagcccaaaattagtaaatttgacttt
ctaatggctagttcccagggcaagataaaatccagtgaagagatgatcaagagtgaaatg
gaaacatttgacctttcagtacaaggatctcataaaaggagtctgagcctgggggataag
gaagtgacccgtcttgcagcaccttcagaacaggcattcagagaccgttctaatacttta
aatgagaaaccagcagcaccactgccagtcatcagagacaaatataaggacctgactgga
gaagtggaggaaaatgaacgttatgcctatgaatggcaaagatgcttggaaagtgcattg
caggtgatcaacaaggccagtgagactctgaatggaattagcagctcaacggtatgcacc
gaagtcattcagtcgacgcaaggcatggagtatctcttgggggtaatagaggtgtataga
gtgaccaaacgcgttgagcttggaatcaaagccacagccgtgtgtaatgagaaacttcag
ttactgatgaaggaaatcgagaatatttggagcagtctcacaatattcatgtcgctcact
cccctcacgccagatgaaaactctctggatttctcttcctgcatcctgcgacctggaata
aaaaatgcaaaagagttagcctgtggagtttgccttcttaatgttaactccagaagcaag
aaggaagaaaacttggaggatcatccaaaacaagccttcaattcggagagtgacaatttt
aagttatcttatggaggtcaccagtatcatgccagctgtgccaatttctggattaattgc
gtggagcctaaaccaccaggcctcatcctaccagacttgctctga
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integrated database retrieval system
