Leucoraja erinacea (little skate): 129714008
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Entry
129714008 CDS
T09122
Name
(RefSeq) transcription intermediary factor 1-beta-like isoform X1
Organism
leri
Leucoraja erinacea (little skate)
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Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_5
zf-RING_UBOX
PHD
Bromodomain
EDS1_EP
TPR_22
Motif
Other DBs
NCBI-GeneID:
129714008
NCBI-ProteinID:
XP_055519458
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All DBs
Position
37:13004233..13044796
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AA seq
1360 aa
AA seq
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MEAAVVLECGDDPGPERGVDGPVVGPEADADALRLVEPGPGLLERCGVCRGRLRERQPRL
LPCLHSVCKGCLHGGLDASGSPQADGLICCPVCRQQCYIRDIIENYFLRDTGELDPGSNK
KVSQVCTSCEDNAVSSSFCVECAEWLCDACVEAHQRVKFTKDHTLSKKNPGFTVDGRTNC
ERPIFCSIHRQETLKLFCETCDTLTCRDCQLLTHKDHRYQFLEEAIKNQKMTLENLVKKL
TEKKTQLQVTTKQVRTRLRDVQDMQKKVQVEIKMAILQIMRELNKRGKTLIQRVERLAEE
QQLKLEQQHLSMSKLYRQMDHVLKFASWAVSTDNSTALLLCKKLIFYQLQRGLQSKVNTE
ELKNDIITFLWDSAFWTKNAANFGNVMIEVPSALSAHISVQHPSMSVHCPLPIAQHQPAP
QHQSSHCPQPVAQHQSAPHHQSAPHHQSAPQHQPAPHHQPAPHHQPAPHHQPAPHHQPAP
QHQPAPHHQPAPHHQPAPQHQSAPQHQSAPQHQSAPQYQSSHCPQPVAQHQSAPQHQSSP
HHQSAPQHQSSPHHQSAPQYQSSHCPQPVAQHQSAPQYQSSHCSQTLAQHQSNNRMIAQQ
GNSWQNHVPMQPPHRLPPPNYQQTALPPPRQPPPPQSTQQAIIRQPHTAASWPPVNSLSR
MQQAVQLVKPTSTMTSANGRYLQQMQVQVVQQGSILSMQQQQQQQLMGQVLLLPQMNGMQ
VRQPQGHTQGAAKQSISGGQTATLYQQMSMYQPTVVSKLPSPTPRQQLSFGPSTAGGVQS
PPVQQISTSTGLSNTPGSRPSPPVQQALRSNTATSRQLLTTAAPQHAYSNIPAAGHSTPV
GAHCHRSPPSSHRLGNSPVDQLKMLVQQATSYPRVILPHRDGPATAHHFAQEQYFCAGPP
LVPQQVGRDDSLLYSLILTSNGTSPWSEAGAEGCVKGQPTCHVPRAFTEPRRGVPFKLSN
ACSTTEQEGQGNPIKQLQEASESGCNPLQCTLEHAGGSSDLNVKPKLNMKVPYVRLERLQ
IDLSTDTELPTFKLLPGSGQDEFSLIIIEGEGLPLNPPFTAQTLESTLTPPNSVSPASVT
EIEFVFNERTEVTSKRSHHALSPTPSPSEKSPGSIPDLKASPLCSVSEKGEEQDEVLCVV
CGKGGELPCCSHCLKVFHVGCHVPALLSMPSVEWTCSLCVDLATSEVQSESSSTLANIGN
ATKDGLGAVDQQKCERLLLLLLSHKMCQAFHNPSGASQLKRQPLDLSSLRAKLEKTSTPH
YSSPDEFVLEARLLFKTFELSQEKKEVAESVLMLESFFEEKLADVFNGKTFGSRAAKQGL
ESGSMHCDQTDCRDGSRHTEQADSGPTQPKRQRLDEGQPL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgccgtggtgctggagtgcggggacgatccgggccctgagcggggagtggac
gggcctgttgtaggccctgaggccgatgctgacgcattgaggctagtggagccgggcccg
ggccttctggagcgctgcggcgtgtgtcgaggccgtctacgggagcgccagccccgcctg
ctgccctgcctgcactcggtgtgcaagggctgccttcacggcgggctcgacgccagcggg
agcccgcaggcagacgggcttatttgctgccctgtttgcagacaacaatgttacataagg
gatatcatagaaaactacttcctaagggatactggtgaattggaccctggctcgaacaag
aaggttagccaggtatgtaccagttgtgaagacaatgctgtgtcctccagtttttgtgtc
gagtgtgctgagtggttgtgtgatgcctgtgtagaggctcaccagagagtgaaattcaca
aaggaccacactctgagtaagaagaatccagggttcacagtagatggaaggacaaactgc
gagcgaccgatcttctgctccattcacaggcaggagaccctgaaactgttctgtgagacg
tgcgacacattaacctgccgggactgccagctgctcacccacaaagatcatcgatatcaa
tttctcgaggaagctattaagaaccagaagatgacgctggaaaacctggtgaagaagctg
acggagaaaaaaactcagctgcaagtgaccaccaagcaagttcgtactaggttaagagat
gttcaggatatgcagaagaaggtccaggtggagatcaagatggcaatcctgcagatcatg
agagagctaaataaacggggcaagacactcatccagagagtggagaggttggcggaggag
caacagctaaaactggagcaacaacatctttccatgtccaaactgtaccggcagatggac
catgtcttaaagtttgcttcgtgggccgtcagtacggataacagcacagcactgctgctt
tgcaaaaaactgatcttctaccagttacaaagaggattgcaatcaaaggttaacacagag
gagttgaagaatgacattattacatttctctgggactctgccttttggactaagaatgca
gctaattttggcaatgttatgattgaagttccctcagcgttgtcagcacatatttcagta
caacatccgtcgatgtctgtccattgccccctgcccattgcacagcatcaacctgccccc
caacatcagtccagtcactgcccccagcctgtggcccagcaccaatcagctccccaccac
caatctgccccccatcaccaatctgctccccagcaccaacctgccccccaccaccaacct
gccccccaccaccaacctgccccccaccaccaacctgccccccaccaccaacctgccccc
cagcatcaacctgctccccaccaccaacctgccccccaccaccaacctgccccccagcac
caatctgctccccaacaccaatctgctccccaacaccaatctgcaccccagtatcagtca
agccactgcccccagcctgtggcccaacaccaatctgccccccaacaccaatcatccccc
caccaccaatctgccccccaacaccaatcatccccccaccaccaatctgctccccagtat
cagtcaagccactgcccccagcctgtggcccagcaccaatctgctccccagtatcagtcg
agccactgctcccagaccctggcccaacaccagtccaacaatcgaatgattgcacagcaa
ggaaactcctggcaaaatcacgtacctatgcagcccccccatcgccttccaccacccaat
taccagcagacagctctcccacctccacgccagccacctccaccgcagagcacgcagcag
gccatcatccgtcagcctcacacggctgcatcttggccacctgtgaacagcctctcgcgg
atgcagcaagcagtgcagctcgtgaagccaacaagcacaatgaccagtgctaatgggagg
taccttcagcagatgcaggtgcaggtggttcaacaagggagcatcttgtcaatgcagcag
cagcagcagcagcagctcatgggtcaggtgctcttactgccacaaatgaatggaatgcaa
gtgcgccagcctcaggggcatactcagggagctgccaagcaatcgatcagtgggggtcag
acagcgacactgtaccagcaaatgtccatgtatcagcctactgtcgttagtaaattacct
tccccgacaccccggcagcaactgtcctttgggcctagcacagctggtggtgttcagtct
ccaccagtgcagcaaatatcaacatccactgggctatcaaacactcccggcagtcgacca
tctcctcctgtgcaacaagcactgagatcgaatactgctaccagtcggcagttgctaaca
actgctgccccccagcacgcatactccaacatccctgctgctgggcatagtactccggtt
ggtgcacattgccatcggtctccaccgtcaagccatcgccttggcaacagcccggttgac
caactcaagatgttggtgcagcaggcaacctcgtacccccgtgtcatactgccccacaga
gatggcccggccactgcccaccattttgcgcaagaacagtatttctgtgcggggccccct
ctagtgccacagcaggttggtagagatgatagcttactgtactctctgatcctgacctcc
aatggaacctcgccctggtctgaggcgggagcggaaggatgtgtgaaagggcagcctaca
tgtcacgttcctcgtgcattcactgaaccgaggaggggtgtgcccttcaagctgtcaaat
gcctgcagcaccactgagcaagaggggcagggaaaccccattaaacagttgcaggaagct
tcagagtccggatgtaatcctttgcagtgtactctagagcatgctggtggcagctcggac
ttgaacgttaaacccaaattgaacatgaaagtcccatatgtgcggttagagcgactgcag
atcgatttatctactgacacagagctgccgaccttcaagctgttaccaggcagtgggcag
gatgagtttagcctgatcatcatcgaaggcgaaggcttgcctctcaatccacccttcacg
gcacaaactctggagagcaccttgacgccaccgaactccgtctctcccgcatcggtgact
gaaattgaatttgtctttaatgagagaaccgaggtaacaagcaagcgctcccatcacgcc
ctgagccccacgccctcccccagcgaaaagtcacctggaagtattccagatctcaaggcg
tccccgctgtgcagcgtgagtgagaagggcgaggagcaggatgaggtgctgtgtgtcgtc
tgtggcaagggaggcgagctgccctgctgcagccactgtttgaaggtgttccatgtgggc
tgccacgtcccagccttgctcagcatgcccagtgttgaatggacctgttccttatgtgtg
gatttggcgacatctgaagttcagagtgaaagctcgtcaacattagcaaacattggaaat
gccacaaaggatggccttggtgctgtcgatcagcagaaatgtgaacgtttgctgttgttg
cttctgtctcataagatgtgccaggcctttcacaacccgagtggggcctcccagttgaaa
agacagccgttagatttgtcttctctgagagcaaaacttgagaagacaagcactccccat
tattcatcccctgatgagtttgtgcttgaggctcggctgttgtttaagacatttgaactg
agtcaggagaaaaaggaggttgccgagtctgtactgatgctcgagtcattctttgaggaa
aagttggcggatgtcttcaatggcaaaacctttggcagcagagcagccaagcaggggctg
gagtcgggcagcatgcactgtgaccaaactgactgcagggatggcagccgccatacagag
caggctgacagtggccccacgcagccaaagaggcaacggctcgacgagggccagccactg
tga
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