KEGG   Leptospirillum ferrooxidans: LFE_0621
Entry
LFE_0621          CDS       T01809                                 
Name
(GenBank) type I sitespecific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lfc  Leptospirillum ferrooxidans
Brite
KEGG Orthology (KO) [BR:lfc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lfc02048]
    LFE_0621
Enzymes [BR:lfc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LFE_0621
Prokaryotic defense system [BR:lfc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LFE_0621
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 ResIII HSDR_N DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: BAM06337
UniProt: I0IM38
LinkDB
Position
600395..603358
AA seq 987 aa
MTTEKGIEEDLISKLQGLKYTFRPEIRNRSSLESNFRTKFEALNRVNLTDDEFARLLDEI
TSPDVFISAQRLRSMNSFDRDDGTPLNYTLVNIRDWCKNDYEVVNQLRVNTHSSHHRYDV
ILLINGVPVVQIELKSLSVTPRRAMQQIVNYKNDPGNGYGSTLLSFIQLFIVSNQTNTSY
FANNNARHFSFNAEERFLPVYKFAAEDNRKIDSLDKFAEKFLSKCFLGEMISRYMVLVAS
EQKLLMMRPYQIYAVKAIVDCIHQRCGNGYIWHTTGSGKTLTSFKASTLLKDNPDIDKCL
FVVDRKDLDRQTREEFNRFQEGCVEENTNTETLVSRLLSDDYADKVIVTTIQKLGLALEG
SNKRNYRERLSPLRSKRMVFIFDECHRSQFGDNHKAIKEFFPNAQLFGFTGTPIFEANAS
TQQVDGDQARLRTTNDLFQRCLHQYTITHAIDDENVLRFHVDYYKPEGKNPPQPGQAMAK
EKILETILSKHDTATNSRKFNALLATQSINDAIEYFELFQRLQSAKIIEDSNFIPLNIAC
VFSPPANGNKDILQIQEALPQEKEDNQEDPEGKKAALERIIADYNVRYGTNHRMSDFDLY
YQDVQKRIKDQQFPNLDLPHSQKIDITIVVDMLLTGFDSKYLNTLYVDKNLKYHGLIQAF
SRTNRMLNDSKPYGNILDFRRQQNLVEEAIALFSGEKVNNPREIWLVDPAPKVVEKLQTA
TKQLETFMQSQGLTFTPEDVPNLKGDAARSQFIELFKEVQRMTAKVDQYTDLTNEQIATI
SRITPPDMLQGFRSQYLETARQLKEKQDKGNANPKVNEIDFKFVLFASAVIDYDYIMNLI
ARLTQQKPGKQTMTREQLIGLIQSDSKFLDDRDDLADYIRSLPVAQALDENQIREGFDRF
KAEKKAEVLSDLAIQHGLDSQALQDFIDEVLRRRIFDGERLSELFAPQNLGWKSRIQKEL
ALMEELAPLLRKLAHGREISGLEAYEQ
NT seq 2964 nt   +upstreamnt  +downstreamnt
atgacgacagagaagggtattgaagaagacctgatctcaaagcttcagggtctcaaatat
acctttcgtcctgaaattcgcaatcgatcgtccctcgaatccaactttcggaccaagttc
gaggcattgaaccgcgtcaatctgacggatgacgagtttgcacgcctgctcgacgaaatt
accagtcccgatgttttcatttccgcccagcggctgcgttcgatgaactccttcgaccga
gacgacggaaccccactcaactacacgttggtcaatattcgcgattggtgcaaaaatgac
tacgaggtagtcaaccaattgcgggtcaatacccattcgagtcaccaccgctacgatgtc
atcctgctcatcaacggcgtgcctgtagtgcaaatcgaactcaagtccctttccgtcact
ccccgccgggccatgcaacagatcgtcaattacaagaacgaccctggcaatggctacggc
agtacgctcttgtcatttatccagctcttcattgtcagcaatcaaaccaacacctcgtat
tttgccaacaacaatgcccgacacttttccttcaatgccgaagagcgctttttgccagtc
tataaattcgccgccgaagacaacagaaagattgacagccttgataaattcgccgagaag
ttcctttccaaatgctttcttggcgagatgatcagccggtatatggtgctggtggcaagc
gagcaaaaactcttgatgatgcggccttaccagatctatgcggtgaaggcgattgtcgat
tgcattcaccagcgttgtggcaatggctacatttggcatacaactgggtccggcaagacg
ttgacctcatttaaagcctccactcttctcaaggacaaccctgatatcgataaatgcctt
tttgtggtcgatcgaaaggacctcgaccgacagacccgagaggagtttaaccgattccag
gaaggctgcgtcgaagaaaacaccaatactgagaccttggtatcgaggctactctcggac
gactacgccgacaaggtcatcgtcaccaccatccagaaactgggcctggcactggaagga
tcaaacaaacgcaactaccgcgaacgcctgtcccctttgcggagcaaacgtatggtcttc
atcttcgacgaatgccaccgctcccaattcggcgacaaccacaaagcgataaaagaattt
ttcccgaacgctcagctctttgggtttaccggcacgcccattttcgaggccaacgccagt
acccaacaggtcgatggcgaccaagcgcgattgcgcaccaccaacgatctctttcaacgt
tgtctccaccagtacaccatcacgcacgccattgatgacgagaacgtcttgcgttttcac
gtcgattattacaaaccggaagggaaaaacccgccccaacccggtcaggcgatggctaag
gaaaagattctcgaaactatcctttcaaaacacgacaccgccaccaatagccgcaagttc
aacgctctcctagccactcaatcgattaacgacgccatcgaatacttcgagctttttcag
cgtcttcagtccgccaagatcatagaagactcgaactttattccgctcaacatcgcctgc
gtcttttctcctccggccaacggaaacaaagacatcttgcagatccaggaagcccttccc
caagaaaaggaagacaatcaggaagatcccgagggcaagaaggcggccctggagcgaatc
atcgccgactataatgtccgctatggaaccaaccaccgcatgagcgactttgacctctac
taccaggatgttcaaaagcggatcaaggatcagcaattccccaatttagacctgccccat
agtcaaaagatcgacatcaccatcgtcgtggacatgctgcttaccggtttcgactccaaa
tacctgaacaccctctatgtggacaagaatctcaaataccatggtttgatccaggcgttt
tcccgaacgaaccgcatgctgaacgacagcaaaccctatgggaatatcctcgattttcgc
cgccagcaaaatctggtggaagaagccattgccctgttctccggagagaaggttaacaat
ccgcgcgagatctggttggtggacccggctcccaaagtcgtggagaagttgcagaccgcg
accaagcaactagagaccttcatgcagtcgcagggactcacttttacaccggaagacgtt
cccaacctgaaaggggatgccgcccgtagtcagttcatcgagctctttaaagaagtgcag
cgcatgaccgccaaggtcgaccagtacaccgacctgaccaacgagcagatagcgacgatt
tcccgcatcactcctcctgatatgttacagggcttccgctcccagtatctcgaaactgcc
cgccaactcaaggagaaacaggacaaaggcaacgccaatcccaaagtgaacgagatcgac
tttaagtttgtgctctttgcctcggcggtgatcgactatgactacatcatgaatctcatc
gcgcgcctcacccaacagaaaccgggcaagcaaacgatgacccgcgaacagttgattggg
ctcatccagtctgattccaagtttctcgacgaccgtgacgatcttgccgattacattcgc
agtctgcccgtggcgcaggcactggatgaaaaccagatccgggaaggattcgatcgattc
aaggcggaaaagaaagcggaggttctgtcagacttggcgatccagcacggcttggattca
caagcgctgcaagattttattgacgaggtgcttcgccggcgcatcttcgacggggagcgg
ctgagcgagctgttcgctccacaaaatctcgggtggaaatcccgaatacagaaagaactg
gcccttatggaggaacttgcccctttactccgaaaactcgctcatgggcgagagatctcc
ggattggaggcatatgagcagtaa

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