Limosilactobacillus fermentum IFO 3956: LAF_0521
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Entry
LAF_0521 CDS
T00699
Name
(GenBank) alanyl-tRNA synthase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LAF_0521
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lfe01007
]
LAF_0521
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfe03016
]
LAF_0521
Enzymes [BR:
lfe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
LAF_0521
Amino acid related enzymes [BR:
lfe01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LAF_0521
Transfer RNA biogenesis [BR:
lfe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LAF_0521
Prokaryotic type
LAF_0521
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
LBP_M
DUF3659
Motif
Other DBs
NCBI-ProteinID:
BAG26857
UniProt:
B2GB25
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All DBs
Position
618559..621207
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AA seq
882 aa
AA seq
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MKELKKLNSAQIRRMYLDFFVQHGHTEMPSRSLVPVNDPTLLWINSGVATMKNYFDGKVV
PDNPRMTSSQKSIRTNDIENVGKTARHHTMFEMMGNFSVGDYFKKEAITWAWELLTSDEW
FGFDPERLYITYYPKDNDAHQFWLDAGVKEDHLLADQDNFWDIGQGPSGPDTEVFYDRGQ
EMNNLPEDDPESYPGGENERYLEIWNIVFSQFNHTPEDTYEPLPNKNIDTGMGLERVVSI
FENAKTNFETDLFMPLIKQVEGFSADKQYGQNAADDVQFKIIADHIRSITFAIGDGALPS
NVGRGYVIRRLLRRSVVAGKKLGIDEPFLAKMVPTVGEIMKDYYPDVLENADYIASVISS
EEDRFSATLNGGLSLLNSVIDEAKQTDGKQIDGKTAFKLYDTYGFPVELTREYAADEGLT
VDEQGFEAAMTEQQNRARNARDMDNGMGVQSDLWTNFTDESKYVGYTDLVVDNAKVIGLA
ADGKQADQAEPGQHVDVIFDQTPFYAEMGGQVADTGQVIDNYGKVVATVKDVQHAPHQQN
LHTLELTAPIKKGARYKLVVDRARHLKIEKNHTATHLLDQALRNVLGGHTQQAGSLVEAH
YLRFDFNHFGQVTKEDLKKVEDMVNEQIWKEIPVTTVETDIDSAKKMGAIALFSDKYGDK
VRVVKIGDFNTEFCGGDHVKNTNEIGLFKIVSEGGVGAGVRRIEAVTSSDAFAFMQERVD
SLDHIAADLKVAQVKEVAHRVSELQDQLKEATKQNEALQAKLAAQQAGDVFNQAEETAKG
TLIAAEVKVAGMDQLRQMADDWRQKDYSDVLVLATAAGDKANLLVAVKDGLAKTVKAGDL
IKAIAPAINGGGGGRPTLAQAGGKNPAGISEALKLASQFMND
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactgaaaaaactgaactccgcccagattcggcggatgtacttagacttcttt
gttcaacacggacacaccgagatgccgtcacgctccctagtgccggttaacgacccgacc
ctgctctggatcaactccggggtggcaacaatgaagaactacttcgatggtaaggtggtt
ccggacaacccgcggatgacctcttcgcaaaagagtatccggaccaacgacattgaaaac
gtggggaaaacggcccgccaccacaccatgtttgaaatgatggggaacttctcggttggt
gactacttcaaaaaggaagccatcacctgggcctgggaactgttaaccagtgacgaatgg
tttggctttgacccggaacgcctctacatcacttactacccgaaggataacgacgcccac
caattctggctggacgccggggtcaaagaagaccacctcttagccgaccaggataacttc
tgggacattggccaggggccgtccggtccggacacggaagttttttacgaccgcggccag
gaaatgaacaacttaccggaagacgatccggaatcctatccggggggcgaaaacgaacgc
tacctggaaatctggaacatcgtcttctcccagtttaaccacaccccagaagacacttac
gaaccgttaccgaacaagaacatcgataccgggatggggctggaacgggtcgtttcaatc
tttgaaaacgccaagaccaactttgaaaccgacctcttcatgccgctgatcaagcaggta
gaaggcttctctgccgacaagcagtatggccaaaacgccgccgatgacgttcagttcaag
atcatcgccgaccacatccgttcgatcacctttgcgattggcgacggggccctgccatcc
aacgtcgggcgtggctacgtgattcgccggctcttacggcgttcggtggtggccggcaag
aagttagggattgacgaaccgttcctagctaagatggtacccaccgttggcgaaatcatg
aaggactactacccagacgtcttagaaaacgccgactacatcgcctcagtgatctcctct
gaagaagaccgcttctccgccactttaaacggggggctgagcctgttaaacagcgtgatc
gatgaggctaagcaaactgatggcaagcaaatcgacgggaaaacggccttcaagctttac
gatacctacggcttcccggttgagctgacccgtgaatacgcagccgacgagggcttgacc
gttgacgaacagggctttgaagcggcgatgaccgaacagcaaaaccgcgcccgcaacgcc
cgtgacatggacaacgggatgggggtgcaaagcgacctgtggaccaacttcacggacgaa
agtaagtacgtgggctacaccgacctggtggttgataacgccaaggtaatcgggttggcc
gccgacggtaagcaagctgaccaagcggaaccgggtcaacacgtcgacgtcatcttcgac
cagaccccgttctacgccgaaatggggggccaagtagctgacaccggtcaggtcatcgat
aactacggcaaggtggttgccacggttaaagacgtccaacacgccccacaccaacaaaac
ctccacaccttagagttaaccgccccaattaagaagggcgcccgctacaagttagtggtg
gaccgggcccgccatctcaagattgaaaagaaccacaccgctacccacttgctggaccaa
gccttacgcaacgtcttgggcggccacacccaacaagccgggtccttagtggaggcccac
tacctacgctttgacttcaaccacttcggtcaggttactaaagaggaccttaagaaggtt
gaagacatggtcaacgaacagatctggaaggaaattccggtcacgacggtcgaaaccgac
attgattccgctaagaaaatgggggcaatcgccctcttctccgacaagtacggtgacaag
gtacgcgtcgttaagattggtgatttcaacaccgaattctgtggtggggaccacgtcaaa
aacaccaacgaaatcggcctcttcaagattgtttccgaaggtggggtcggcgccggggtc
cggcggatcgaagccgtgacgtccagtgacgcctttgccttcatgcaagagcgggtcgac
agcctagaccacatcgccgccgacctgaaggtggctcaagttaaggaagtcgcccaccgg
gttagtgagttgcaagaccagctcaaggaagccacgaagcaaaacgaggccctgcaagct
aagttagccgcccaacaagccggcgacgtcttcaaccaggcggaagaaacggcgaaggga
accttgattgccgccgaagttaaggtggccggaatggaccaactgcgtcaaatggctgac
gattggcgccaaaaggattactccgatgtcttggtcttagccacggccgctggtgacaag
gccaacctcttggtagcagtcaaggatggcctggccaagacggtcaaggctggtgacttg
atcaaggcaattgccccggccattaacgggggcgggggcggtcgcccaaccctggcccag
gccggcggaaagaacccagccgggattagcgaagctctcaagctggctagccaattcatg
aatgattaa
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