Limosilactobacillus fermentum IFO 3956: LAF_0609
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Entry
LAF_0609 CDS
T00699
Name
(GenBank) competence protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe00240
Pyrimidine metabolism
lfe01100
Metabolic pathways
lfe01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LAF_0609
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lfe02044
]
LAF_0609
Enzymes [BR:
lfe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
LAF_0609
Secretion system [BR:
lfe02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
LAF_0609
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
Motif
Other DBs
NCBI-ProteinID:
BAG26945
UniProt:
B2GBB3
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Position
709953..710432
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AA seq
159 aa
AA seq
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MKKRIDWDQYFMVQAALLASRSTCTRLSVGAVLVRDKRIIGSGYNGAVAGDEHCIDVGCY
LRDGHCVRTIHAEMNALLQCAKFGTSTDGAMVYVTDFPCLQCTKSLLQAGITQINYLRNY
HNDDYAMKLIELKGVTLHQIKLDADILDQVNLDQYINPD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaattgattgggaccagtacttcatggttcaagccgccctgttggcatcc
cggagcacttgcacccgcttgtcggtgggggccgtgttggttcgcgacaaacggatcatc
ggctccggctataacggggcggtggctggtgatgagcactgcatcgacgtcggttgttac
ctgcgcgatggtcactgtgtgcggacgatccacgcggaaatgaatgcccttttgcagtgc
gccaagtttggcacctcgacggacggggcgatggtctacgtgactgacttcccgtgcttg
cagtgcacgaagagcctcttacaagccgggatcacccaaatcaattacctccgtaattac
cataacgatgattacgctatgaagttgattgagctaaagggcgtcacccttcaccaaatc
aaactagacgcagatatcttagaccaggttaacctcgaccaatacattaacccggactaa
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