Limosilactobacillus fermentum F-6: LBFF_1109
Help
Entry
LBFF_1109 CDS
T02669
Symbol
gadB
Name
(GenBank) Glutamate decarboxylase beta
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff00250
Alanine, aspartate and glutamate metabolism
lff00430
Taurine and hypotaurine metabolism
lff00650
Butanoate metabolism
lff01100
Metabolic pathways
lff01110
Biosynthesis of secondary metabolites
lff01120
Microbial metabolism in diverse environments
lff02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LBFF_1109 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LBFF_1109 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LBFF_1109 (gadB)
00430 Taurine and hypotaurine metabolism
LBFF_1109 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LBFF_1109 (gadB)
Enzymes [BR:
lff01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
LBFF_1109 (gadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
AGL89003
UniProt:
A0A806ITK4
LinkDB
All DBs
Position
complement(1135184..1136587)
Genome browser
AA seq
467 aa
AA seq
DB search
MSLYGKYDQEERNTLDPIFGSFSEDHPLPKYKLNERPVEPRIAYQVVKDQLLDEGNARLN
LATFCQTYMEPEAVKLMSETFDKNAIDKSEYPRTAEIENRCVNIIADLWHAPKDEEFMGT
STVGSSEACMLGGMAMKFSWKQRAAKLGLDVKAKRPNLVISSGYQVCWEKFCTYWDVEMR
TVPMDWEHQSLDLNHVLDYVDEYTIGIVGIMGITYTGRYDDIDALDKLVEEYNQHTDYKV
YIHVDAASGGFYTPFMEPDLKWDFRLKNVISINASGHKYGLVYPGIGWVLWRDQKCVPEK
LIFRVSYLGGEMPTMAINFSRGASQIIGQYYNFIRYGFEGYHDIHKRTHDVAVYLAQEIE
KLGLFEIVNDGSRLPIVCYRHKEDQDHEWTLYDLADRLAMKGWQVPAYPLPKDLDQIEVQ
RIVVRADFGMGMAYDFVEDMKDAIKELNGAHLVFHEKSSLKKYGFTH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcactttacggaaagtacgaccaagaagaacgtaacactctcgacccgatctttggc
tcctttagcgaggaccacccgctgccaaagtataaattgaatgaacgcccggtcgaaccg
cggattgcctaccaagtggtcaaggaccagcttttggacgaagggaacgcccgcttgaac
ctggcgaccttttgtcaaacctacatggagcccgaagccgttaagctgatgagcgagacc
ttcgataagaacgcgatcgacaagtccgagtacccgcggacggccgaaatcgagaaccgc
tgcgttaacatcatcgctgacctttggcacgctcctaaggacgaagagttcatggggacg
tcgacggttgggtcctctgaggcctgtatgctcggcgggatggcgatgaagttcagttgg
aagcaacgggccgctaagctcggtttagacgtcaaggctaagcgacccaacctagttatt
tcgtcgggttaccaggtttgctgggagaagttctgcacctactgggacgtcgaaatgcgg
acggtgccaatggactgggaacaccaatccttggaccttaaccacgtgctggactacgtc
gacgagtacacgatcgggatcgttgggatcatggggatcacctacaccgggcgctacgac
gatatcgatgccctcgacaagctggtcgaagaatacaaccagcacaccgactacaaggtt
tacatccacgtcgacgccgcctctggtggtttttataccccgttcatggaacctgacctc
aagtgggacttccggctcaagaacgtaatttcgatcaacgcttctggtcacaagtacggc
ttggtgtacccggggattggttgggtgctgtggcgcgatcaaaagtgcgtgccggaaaag
ctgatcttccgggtttcctacctgggtggcgagatgccgacgatggcgattaacttctcc
cgcggggcctcgcaaatcatcggacagtattacaacttcatccgttacggctttgaaggc
taccacgacatccacaagcggacccacgacgtcgccgtttacctggcccaagagatcgaa
aagctcggcctctttgaaatcgtcaacgacggtagccgcctgccgattgtctgctaccgc
cacaaggaggaccaagatcacgagtggaccctctacgacctggccgatcgtttggcaatg
aagggctggcaagtgccggcctacccactgcccaaggacctcgaccaaattgaagtccag
cggatcgtcgtccgcgccgacttcgggatggggatggcctacgacttcgttgaggacatg
aaggacgccattaaagaacttaacggcgcccacttggtcttccacgagaagagctccctg
aaaaagtacggctttacccactaa
DBGET
integrated database retrieval system