Leptospirillum ferriphilum ML-04: LFML04_2484
Help
Entry
LFML04_2484 CDS
T02319
Symbol
rnc
Name
(GenBank) dsRNA-specific ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfi03019
]
LFML04_2484 (rnc)
03009 Ribosome biogenesis [BR:
lfi03009
]
LFML04_2484 (rnc)
03036 Chromosome and associated proteins [BR:
lfi03036
]
LFML04_2484 (rnc)
Enzymes [BR:
lfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LFML04_2484 (rnc)
Messenger RNA biogenesis [BR:
lfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LFML04_2484 (rnc)
Ribosome biogenesis [BR:
lfi03009
]
Eukaryotic type
90S particles
RNase
LFML04_2484 (rnc)
Prokaryotic type
rRNA processing factors
LFML04_2484 (rnc)
Chromosome and associated proteins [BR:
lfi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LFML04_2484 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AFS54672
UniProt:
J9ZGB2
LinkDB
All DBs
Position
complement(2360848..2361981)
Genome browser
AA seq
377 aa
AA seq
DB search
MKGGALFEYRAKNLPRAPEHLIRILGLPFKPTMRIEEALTHRSASHERGRKTPIPNYERL
EFLGDRVIGLIVSEYLLNTWPSASEGDIGQIFSGIVSTQTLASIARRMDLGSYMILGKGS
HSSGDRENSSLLADTFESLAAAIYLEYGLETCRQVLIPWFTQPLIEIVQKIENLREIRDS
SSGPGSSVIATQPAPPRAGSLNYKLLLQKWCQSKAEELPVYQVLEEIGPAHQRRFRLGVF
LKGKQLGEAEGTTKRGASVHAAKNAWERIQSGFNILGDEVQDSVETHSGSEGNPLENQKN
ETQPLDDKPRGENEQKNDQISFPENSEEGLEKKFDEEESSHPDNVKHSETQDETFGLDES
VLYSGIARETHKEESGG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggggggctttgttcgaatacagggcgaaaaaccttccaagagctccagagcat
ctcatacgaatactgggcttaccatttaaaccgacgatgcgcattgaagaagcgttaacg
catcggtccgcctcccatgaaagaggccggaagaccccgatccccaattatgagcgtctg
gaatttcttggggacagggtcattgggttgatcgtgagcgagtaccttctcaacacatgg
ccatctgcttctgaaggagatatcggacagattttttcagggatcgtcagcacccagacg
ctcgcatcgatagcgagaaggatggaccttggatcttatatgatcctcggtaagggcagc
cattcatcgggtgacagagaaaattcctccttgttggcagacacctttgaatctttggct
gcagcgatatatcttgaatatggccttgaaacgtgcagacaggtccttattccctggttt
acccagccactcatcgaaattgtacaaaagatcgaaaacttgagagagattcgagattct
tccagtgggcctggttcttccgttattgccactcaacccgctcctccaagggccggaagt
ctgaattataaacttttgcttcagaaatggtgtcagtcaaaagctgaagaactccctgtc
tatcaggttctggaagagataggtcctgcccatcaaaggcgctttaggctcggcgtcttc
ctgaaaggcaaacaattgggtgaagccgaagggacgacaaaaagaggagcgtctgttcat
gcagcgaaaaatgcatgggagcgtattcaaagcggattcaatattttgggggatgaagta
caggactctgttgaaacgcattccggcagcgaaggaaatcctttagagaatcaaaagaac
gaaacacaacctctggatgacaagcccaggggcgaaaacgaacaaaaaaatgaccaaatt
tcttttcctgaaaactctgaagaggggctggaaaaaaaatttgatgaggaggagtcatcc
catcctgacaatgtgaaacactctgaaacacaagatgaaacattcgggttggatgaaagt
gtactgtattcaggaatagcgagagaaactcataaggaagaaagcgggggataa
DBGET
integrated database retrieval system
