Limosilactobacillus frumenti: LF145_01965
Help
Entry
LF145_01965 CDS
T06870
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lfn
Limosilactobacillus frumenti
Pathway
lfn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF145_01965 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfn03400
]
LF145_01965 (uvrB)
DNA repair and recombination proteins [BR:
lfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF145_01965 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LF145_01965 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_7
AAA_19
AAA_22
AAA_25
AAA_5
AAA
Motif
Other DBs
NCBI-ProteinID:
QFG72203
LinkDB
All DBs
Position
436359..438395
Genome browser
AA seq
678 aa
AA seq
DB search
MIYRQPHKPFELVSDYKPTGDQPEAIKELTNGIEKGEKAQILLGATGTGKTFTISNVIAN
VNKPTLILSHNKTLAGQLYGEMKKFFPHNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASI
NDEIDELRHSATSSLMERDDVIVVASVSSIFGLGDPSEYHNHVVSLRVGQQVDRDQFLRQ
LVNIQFERNDIDFQRGRFRVHGDVVEVFPASRDDKALRIEFFGDEIDRIRVVDALTGEVL
GDREHVSIFPATHFLTSDEIMDRALPQIEADMKTQVHKFTKEGKLLEAERLQQRTTYDIE
MLREMGYCNGIENYSRYMDGRKPGEPPYTLLDFFPKDFLLVVDESHQTMPQVRGMYNGDH
ARKKMLVDYGFRLPSAYDNRPLKLDEFEKHINQVVYMSATPGPYEEAQTDHVVQQIIRPT
GLLDPTIEVRPVMGQIDDLVAEINKRVEKHERVFVTTLTKKMSEDLTDYLKDLGLKVKYL
HSDIKTLERTQIIRDLRLGKFDVLVGINLLREGLDVPEVSLVAILDADKEGFLRNERSLI
QTIGRAARNAHGAVIMYADTITDSMQKAIDETARRRKIQQAYNKKHGITPKTIIKPIQEA
ISATKKSADSGEKETDTEFTTKDFAKLSHTAQENMVEELTEQMRAAAKRLDFEQAATLRD
TVMELQSQMSGKKVKHGK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgatttatcgtcaaccacacaagccgtttgaactggtatctgattacaaaccgactggc
gaccagccggaagcaatcaaagagcttacgaacggtattgaaaaaggcgaaaaggcacag
atcctattgggagccactggtactggtaagacatttacaatttccaatgtcattgccaat
gttaataagccaacgctaattctctcccataataagactttagcaggccagctttatggc
gaaatgaagaaattctttccacataacgcggttgaatattttgtttcctattatgattac
taccaaccagaagcatatgttccttcaagtgatacctacattgaaaaggatgcttccatt
aatgatgaaatcgatgagttacgacactcagcgacctcttcactaatggagcgtgacgac
gtaattgttgtggcatctgtttcttctatttttggattaggggacccgagtgaataccat
aatcatgttgtttccttacgagttggtcagcaggtagaccgcgatcaatttcttcgccaa
ctggtgaatattcagtttgagagaaatgatatcgactttcagcggggtcggttccgggtt
cacggtgacgttgtggaggtatttccagcctcacgggacgataaggcattgcggatcgaa
ttctttggtgatgaaattgaccggattcgggtcgttgacgctttaaccggtgaagtcttg
ggtgatcgggaacatgtatcaatcttcccagcaacccactttttgaccagtgatgaaatt
atggaccgggccttgccgcaaattgaagctgatatgaaaacccaagtccataagttcact
aaagaagggaaactgttggaggcggaaagacttcaacagcggactacttatgatatcgag
atgctccgggaaatgggctactgtaatgggatcgaaaactattctcggtatatggatggt
cgaaagccaggtgagccaccgtacactttgttagacttcttccctaaggacttcttgcta
gtggtagatgaatcccaccaaacgatgccgcaggtgcggggaatgtacaatggtgaccat
gcccgcaagaagatgctggtggattatgggttccgtttgccaagtgcctacgacaaccgg
cctctcaaattggatgaattcgagaagcatattaaccaagtagtctacatgtcagcaaca
ccgggaccgtacgaagaagctcaaacggatcacgttgttcaacagattattcggccaacg
gggttattagatcccacaattgaggtgcggccagtgatgggacaaattgatgacttggtt
gctgaaattaataaacgggttgagaaacatgagcgggtctttgtgacaactttaaccaaa
aagatgtcagaggacctaactgattacctgaaagacctggggttgaaggtgaagtacctg
cactcagatattaaaactttggaacggacgcaaattattcgtgacttgcggttagggaag
tttgatgttcttgtcggcattaacttattgcgggaaggattggatgttcccgaagtatca
ttggtcgcaattttagatgctgataaggaaggcttcttgcggaatgaacggtcattgatt
caaacaattggtcgggcagcgcggaatgctcatggggcagttattatgtatgctgatacg
atcactgactcaatgcaaaaggcgattgatgaaaccgcacggcggcggaaaattcagcaa
gcatacaacaagaaacacggtattacaccaaagacgattatcaagccaatccaggaggca
atttctgcaacaaagaagagtgccgatagcggtgaaaaagaaactgatactgaatttacc
actaaggactttgctaaattgagtcatactgctcaggagaacatggttgaagaactgact
gaacagatgcgggcggcggctaaacggctagactttgagcaggcggctacgttgcgtgat
acagtgatggaattacaaagccagatgagtggcaaaaaagtaaagcacggtaagtaa
DBGET
integrated database retrieval system
