Limosilactobacillus frumenti: LF145_05670
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Entry
LF145_05670 CDS
T06870
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lfn
Limosilactobacillus frumenti
Pathway
lfn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF145_05670 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfn03400
]
LF145_05670 (mutM)
Enzymes [BR:
lfn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LF145_05670 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LF145_05670 (mutM)
DNA repair and recombination proteins [BR:
lfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LF145_05670 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
zf-ribbon_3
TF_Zn_Ribbon
DZR
OrfB_Zn_ribbon
zf-NADH-PPase
zf-TFIIB
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
QFG72851
LinkDB
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Position
complement(1147003..1147836)
Genome browser
AA seq
277 aa
AA seq
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MPELPEVETVRRGLLKIAAGRKISGIDVYYGKTITNDVEKFRQALIGQTIVTVDRRGKYL
LFRFTNDLTMVSHLRMEGKYFNQPIGGPIDKHTHVVFEFTDGSELCYHDTRKFGRMTLVK
TGEEMTVGGLKTIGPEPTANDFTLPYFKAILAKSRGKIKPFLLNQRHVAGLGNIYADEVL
WMSKVNPEQPANSLTDQQIRDLHDNIIKELARAIEYKGTTVHSFTNAFGDAGAFQNQLNA
YGHAGDPCPRCGTKMVKIKVAQRGTTFCPHCQPLEND
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagtggaaacagtgcgccgtggtttattaaagattgctgctggc
cgtaaaatcagtgggatcgatgtttattatggcaagacgattactaatgatgttgaaaaa
tttcgccaggccctgatcggtcaaacgattgtcaccgttgatcggcgtggtaagtatctc
ctttttcgctttactaatgatttgacaatggtctcgcacctgcgaatggagggaaaatac
tttaaccagccaatcggcgggccaattgataaacatacgcatgttgtttttgagtttact
gacggtagtgaactctgttatcacgacactcgtaagtttggtcggatgaccctcgttaaa
accggcgaggagatgacagtggggggcttgaaaaccattggccccgaaccaacagctaat
gactttaccttgccgtacttcaaagcaattttggcaaagagtcggggcaagataaagcca
ttccttcttaaccaacggcatgttgccgggttaggcaatatttacgcggatgaagtctta
tggatgagcaaggttaaccctgagcaacctgccaatagtttaactgaccagcagattagg
gacctacacgataacattatcaaagagctggctcgggccattgaatataagggaacgacg
gttcatagtttcaccaatgcttttggtgatgcaggggccttccaaaaccagttaaacgcc
tatggccatgctggtgatccgtgtccacgctgtggtactaaaatggttaagatcaaggtt
gcacaacgggggacaactttctgccctcactgtcagccattggagaatgactaa
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