Limosilactobacillus fermentum CECT 5716: LC40_0809
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Entry
LC40_0809 CDS
T01958
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lfr03009
]
LC40_0809
Enzymes [BR:
lfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LC40_0809
Ribosome biogenesis [BR:
lfr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LC40_0809
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltr_RsmF_N
Methyltransf_15
FtsJ
Methyltransf_25
Met_10
Methyltransf_3
TRM
UPF0020
SecD-TM1
Methyltransf_4
Cons_hypoth95
Methyltransf_24
DUF4954
MTS
Motif
Other DBs
NCBI-ProteinID:
ADJ41406
LinkDB
All DBs
Position
complement(1438211..1439557)
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AA seq
448 aa
AA seq
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MTKKQAQLTGARAIALATLDKVRTSGAYSNLQLNQALESGQLSGADRRLVTALVYGTLQH
QRTLDYWLSPFIAGKKVRPWVKTLLLMTLFQYQYLDRVPNFAATDEAIEIAKRRGNPGVR
RFVTGVLHAILRNGVADVEKIEDPKQRLAIQASLPDWLVDELVAQYGLAQTEALAKVINE
PARISLRVNLAKATVEEAQALLRSAGVETKPSEVAQNGLVVTKGAVLKTAAFKNGVVTIQ
DESAMLAVESMHLTGHERVLDACAAPGGKTVQIAEALTDGEVYALDIHRHKVGLIEKNAQ
RMGVDDRVFARQLDARQVGQEFADQFFDQILVDAPCSGMGLLRRKPEIRYDKQLGDSQRL
HQIQGAILDSVATKVKKGGIITYSTCTILRQENDETVAEFLKHHPNFRLQKTTTARMLKD
NRQAQTLTLLPSDYGSDGFFISNLQRVQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaaacaagcacaattaacgggggcccgggccatcgccctggcgacgctagat
aaggtccgcacgtcgggggcctattcaaatctccagttgaaccaggccttagaaagcggg
caattatcgggcgctgatcgccgcctagtaacagccttagtgtacggaactctacagcac
caacggaccttagactactggctttccccctttattgccggcaaaaaggtgcgcccttgg
gtcaaaacccttttgttaatgaccctctttcagtaccagtacctggatcgggtacccaac
tttgccgctaccgatgaggcgatcgaaattgctaagcggcgggggaaccctggggttcgt
cgctttgtgaccggggttttgcacgcaattctgaggaacggagtggccgacgttgaaaaa
attgaggaccccaagcagcggttggccatccaagcctccctgccggactggctggttgac
gaattggtcgctcagtatgggctggcccaaacggaggcgcttgctaaggtaattaacgaa
ccggcacggatcagcctacgggttaacctggccaaggccacggtcgaagaagcccaagca
ctgctaaggtcagcgggggtggaaaccaaaccatctgaggtcgcccaaaatggcttagtg
gttactaagggggcggtgttaaaaacggcggcctttaaaaacggggtggtaacgattcaa
gacgaatccgccatgttagccgtggaaagcatgcacctgaccggtcacgaacgggtcttg
gacgcctgtgccgctccggggggtaaaaccgttcaaattgcggaggccttaactgacggg
gaggtctacgccttagacatccaccggcataaggtgggcttaatcgaaaagaacgcgcaa
cggatgggggttgacgaccgggtcttcgcccgccaactcgacgctcgccaggttggccag
gaatttgccgatcagttctttgatcagatcttggttgatgcaccgtgttcggggatggga
cttttacggcggaaaccggagattcgctacgataagcaactgggcgacagccaacgtctc
caccaaattcagggggcaattttggattcggtggccacaaaagtcaaaaagggcggtata
attacctatagtacgtgcacgatccttcgtcaggaaaatgacgagacggtggccgaattt
ttaaagcaccaccccaacttccggttacaaaaaaccaccaccgcacgtatgttgaaggac
aaccgccaagcccagacgctcaccctgttgccgagtgactacggctctgatggtttcttt
attagtaaccttcaacgagttcagtag
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