Leuconostoc gelidum JB7: C269_07340
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Entry
C269_07340 CDS
T02322
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lge
Leuconostoc gelidum JB7
Pathway
lge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C269_07340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lge03400
]
C269_07340
Enzymes [BR:
lge01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C269_07340
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C269_07340
DNA repair and recombination proteins [BR:
lge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C269_07340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AFS40905
UniProt:
A0A9N7BG20
LinkDB
All DBs
Position
complement(1535963..1536790)
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AA seq
275 aa
AA seq
DB search
MPELPEVETVRRGLEKLIVGGQIRQVHLLYPKLINGDSQAFITGVTNASFTAIDRRGKYL
LLRLSNGHTIVSHLRMEGQYSVEPIETRPYKHTEIIFELLDQRQVFYNDTRRFGRMTLTN
THFEINDVPSLAKLGPEPTEKDLALDYMVAIFSRSKKPVKSFLLDQNQIAGIGNIYADEV
LWQSKIHPETPTKTLTVPELSLLRENIIAEMKRAIAHHGTTVHSFSNVFGEVGQFQNELQ
AYGRVGQPCLRCGTTMVKIKVGQRGTTFCPVCQMN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacctgaggttgaaacggttcgtcgcggtttagaaaaattaattgttggt
ggtcaaattaggcaggttcacttactatatcccaagttaatcaatggtgattcacaagca
tttataacaggtgtaacaaatgcttcatttaccgcaattgatcgccgtggtaagtatttg
ttattacgtttgtccaatggtcatactattgtgtcacatttacgcatggaaggacagtat
tctgttgaaccaattgagacaaggccttataaacatacagaaatcatctttgaattatta
gatcagcgtcaagtgttttataatgacacacgtcgttttggtcgaatgacgctaacaaac
acgcattttgagataaatgatgtgccatctcttgctaaacttggaccagaaccaacagaa
aaagacctggctttagactatatggtggccatattttcgcgatctaaaaaaccggtcaag
agttttttgttagatcaaaatcagattgcaggcattggaaatatttatgctgacgaagtg
ttatggcaaagtaaaattcatccagaaacaccgacaaaaacgttaacagtgcctgaactg
tcgctacttcgagaaaatattatcgcagaaatgaaacgtgctattgcgcatcatggtaca
acggtacatagttttagtaatgtgtttggggaggttggccagtttcaaaatgaattacaa
gcatatggtcgcgttggacaaccgtgtttacgttgtggcacgacaatggtgaaaataaaa
gttggacaacgtggcacaactttttgccctgtttgtcaaatgaattag
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