Leuconostoc gelidum JB7: C269_08025
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Entry
C269_08025 CDS
T02322
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lge
Leuconostoc gelidum JB7
Pathway
lge03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lge00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C269_08025 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lge03021
]
C269_08025 (rpoB)
03400 DNA repair and recombination proteins [BR:
lge03400
]
C269_08025 (rpoB)
Enzymes [BR:
lge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C269_08025 (rpoB)
Transcription machinery [BR:
lge03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C269_08025 (rpoB)
DNA repair and recombination proteins [BR:
lge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C269_08025 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AFS41040
UniProt:
A0A9N7BGB9
LinkDB
All DBs
Position
complement(1674706..1678320)
Genome browser
AA seq
1204 aa
AA seq
DB search
MAGHLVKYGKHRTRRSYASIKEVLDVPNLIEIQTASYQWFLDDGIKEMFGDIMPIDDFQG
TLSLEYVDYQLMEPKYNIDEAREHDANYSAPLHVTLRLTNHETGEIKSQDVFFGDFPLMT
EQGTFIINGAERVIVSQLVRSPGIYYNQENDKNGRPRYGTTVIPNRGAWLEYETDAKGIA
NVRIDRTRKLLMTELVRALGFGSDSDILDIFSDQYDALNMTLEKDVHKDMSDSRVEEALK
DVYERLRPGEPKTADSSRALLVARFFDPKRYDLASVGRYKINKKLALKTRLLNHTLAETL
ADPDSGEIIAEKGTTVDKTVMSKLSPFLEREDFKTTTYTPSGDAVLEEPVVLQKIKIQSP
EDPEKTLVLIGNGHIDENDRTVRPADILAGMNYFLNLQEGIGNVDDIDHLGNRRIRSVGE
LLQNQFRIGLTRMERVVRERMSIQDANTVTPQQLINIRPVVAAVKEFFGSSQLSQFMDQT
NPLGEMNHKRRLSALGPGGLTRDRAGVEVRDVHYTHYGRIDPIETPEGPNIGLINSLATY
GRINKYGFIETPYRRVDWTTHMVTDKIDYLTADEEDNFIVAQANSPLNDDGSFVHDTVMA
RFGEENIETPIDRIDYMDVSPKQVVSVGTAAIPFLENDDSNRALMGANMQRQAVPLLDPH
APLVGTGIEYKAAHDSGVAMISRAAGMVEYVDGREIRIRREDGQLDHYELMKFRRSNGGK
NYNQKPIIHEGEHVEADEVLADGPSMEQGELALGQNPLIAFMTWQGYNFEDAIVLNERLV
REDVYTSIHIEEYDSEARDTKLGPEEMTREIPNTGEDQLKDLDADGIIRVGAEVHDGDIL
VGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGVVQNVRIYTPENGDELA
PGVNMMVRVYIAQKRKIQVGDKMAGRHGNKGTVSVVVPEEDMPYMPDGTPIDILLSPMGV
PSRMNIGQVLELHLGFAAKKLGIHVASPVFDGASDDEIEAALREAGLPQDGKSVVYDGRT
GEAFDKRVGVGVMHYMKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAYTLQEILTYKSDDVAGRVKVYESIIKGEPIPRPGVPESFRVLVKELQALGLDM
QVLDGDGEEVELRQMDEDDSILPVDALEKLVRSNPDLLNKEDDEVAAAFLKVTSQDTTKS
NDEI
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggacatttagtaaagtacggtaagcaccgtacccgtcgttcatatgctagcatc
aaagaagtacttgatgtgcctaatttgattgagattcaaacggcatcatatcaatggttc
ttggatgatggtatcaaagaaatgtttggcgacatcatgccaattgacgatttccaagga
acattatctttggaatatgtcgattatcaattgatggaaccaaagtataatattgatgag
gcgcgtgagcacgacgccaattattcagcaccattacatgtaactttacgcttgacaaac
catgaaactggtgaaattaagtcacaagacgtgttttttggtgatttcccattgatgacg
gaacaaggaacgttcattattaatggtgcggaacgtgttatcgtttcacagttagtgcgt
tctcctggaatttattataaccaagaaaatgataaaaatggtcgaccacgttacggcacg
accgttattcctaaccgtggtgcatggttagaatatgagacagatgccaaaggcattgct
aacgtccgcattgatcgtacacgtaagttattgatgaccgaattagtacgtgcgcttgga
tttggttcagattcagatattcttgatattttttctgatcaatacgatgcattaaacatg
actttggaaaaagatgtacacaaagatatgtctgattcacgtgttgaggaagccttgaaa
gatgtttatgaacgcttgcgtccaggtgaaccaaaaactgctgattcatcacgtgcctta
ttagttgcgcgcttctttgatccaaaacgttacgatttagcctcggttggtcgctataaa
atcaacaaaaaattggctttgaagacacgtttgttgaatcatacattagcagaaacatta
gctgatccagattctggtgaaattatcgctgaaaaagggacaactgttgataagacagtt
atgtcaaagttgagcccatttttggaacgtgaagactttaagaccacgacatatacacct
tctggggatgctgtacttgaagaacctgttgtacttcaaaaaattaaaattcaatcacct
gaagaccccgaaaagactttggtattaattggtaatggtcatattgatgaaaatgatcgt
acggtacgccctgcggatattttagcaggcatgaactatttcttgaatttgcaagaaggt
atcggaaacgttgatgatatcgatcacttgggaaatcgtcgtatccgttcagttggtgag
ttgttacaaaatcaattccgtattgggttgacacgtatggaacgtgttgtacgtgaacgt
atgtcaattcaagatgccaacacagtaacgccacagcaattaattaatattcgacctgtt
gttgctgctgttaaggaattctttggttcatcacaattatcacagtttatggatcaaaca
aatccattaggagaaatgaaccataagcgtcgtctatcggctcttgggcctggtggattg
acacgtgaccgtgccggtgttgaagtccgagatgttcattatacgcattacggccgcatt
gatccaatcgaaacaccagaaggtcctaacattgggttaattaactcgttagctacttat
ggtcgtattaataagtatggctttatcgaaacaccatatcgtcgtgtcgattggacaaca
catatggttactgacaaaattgactatttgacagctgatgaagaagataactttattgtt
gcacaagcaaactcacctttgaatgatgatggtagctttgttcatgatacagtaatggcc
cgttttggtgaagaaaacattgaaacaccaattgatcgtattgattatatggatgtgtca
cctaaacaagttgtctctgttggaacagctgctattcctttcttggaaaatgatgattct
aaccgtgctttaatgggtgctaacatgcaacgtcaagcagtaccattgcttgatccacat
gcccctcttgttggtacaggtattgaatataaagctgcccacgattcaggtgttgccatg
atttcacgtgcagctggtatggttgaatatgtcgatggccgtgaaattcgtattcgtcgt
gaagatggtcaattggatcattatgaattgatgaaattccgacgttctaatggtggaaaa
aactataaccaaaaacctattattcatgaaggtgaacatgttgaagctgatgaagttttg
gctgatggtccttcaatggaacaaggtgaattagctttgggtcaaaacccattgattgca
ttcatgacttggcaaggttataacttcgaagatgcaattgttttgaatgaacgattggtt
cgtgaagatgtttatacatcaattcatattgaagaatatgattcagaagcacgagataca
aaacttgggcctgaagaaatgacgcgcgaaattcctaatactggtgaagatcagttgaag
gacttggatgctgatggtattatccgtgtcggagccgaagtacatgatggtgatattttg
gtaggtaaagttacacctaagggtgtgacagaattatcagccgaagaacgtttgcttcat
gcgatatttggtgaaaaagcacgtgaagttcgtgatacatcacttcgtgtccctcacggc
ggcggcggcgtcgttcaaaatgtgcgtatttatacaccagaaaatggtgatgaattagca
cctggcgttaacatgatggtgcgtgtttatattgctcaaaagcgtaagattcaagttggt
gataaaatggctggacgtcatggtaacaagggaactgtttccgttgttgtccctgaagaa
gatatgccgtatatgccagatggtacgccaatcgacatcttgttgtcacccatgggtgtg
ccttcacgtatgaatattggacaagtacttgagttacaccttggtttcgctgctaagaag
ttaggaattcatgttgcatcgcctgtctttgatggggcaagtgatgacgaaatcgaagcg
gccttacgcgaagcaggtttgccacaagatggtaagtcagttgtttatgatggccgtacc
ggtgaagcctttgataaacgtgttggtgttggtgtgatgcactatatgaagttggcccac
atggttgatgataaaattcacgcacgttcaataggaccttattcacttgttacgcaacaa
cctttgggtggtaaagcacaatttggtggacagcgtttcggtgaaatggaagtttgggcg
cttgaagcgtatggcgctgcatataccttgcaagaaattttgacatataagtcagatgat
gttgctggtcgtgtgaaagtctatgagtcaattattaagggtgaaccaattcctcgtcca
ggtgtaccagaatcattccgtgttcttgtgaaagaattacaagcactcggattggacatg
caagtcttggatggtgacggagaagaagttgaactacgtcaaatggacgaagatgattca
atcttacctgttgatgcacttgaaaagttagtgcgttcaaatcctgacttattgaacaaa
gaagacgatgaagtagccgcagcattcttgaaggtaacatcacaagatacgactaaatca
aacgacgaaatttaa
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