Lachnoanaerobaculum gingivalis: QJR73_12620
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Entry
QJR73_12620 CDS
T09491
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lgg
Lachnoanaerobaculum gingivalis
Pathway
lgg03030
DNA replication
lgg03430
Mismatch repair
lgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QJR73_12620 (holA)
03430 Mismatch repair
QJR73_12620 (holA)
03440 Homologous recombination
QJR73_12620 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgg03032
]
QJR73_12620 (holA)
03400 DNA repair and recombination proteins [BR:
lgg03400
]
QJR73_12620 (holA)
Enzymes [BR:
lgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QJR73_12620 (holA)
DNA replication proteins [BR:
lgg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QJR73_12620 (holA)
DNA repair and recombination proteins [BR:
lgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QJR73_12620 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WHE87105
LinkDB
All DBs
Position
2686584..2687552
Genome browser
AA seq
322 aa
AA seq
DB search
MKVLNNDLKNSTFKGIYVLSGDDEFLKNSYKKRLKMAMVGDDQMNYAYFEGKGIDVDAII
DFANTLPFFSEYRCILIEESQWFKSGNDKFLNYISDKPDSTKIIFVEKEIDKRSKLYKKV
KDIGYIAELNHPTDDELKNWAGNIINKSGKKITVSNMDFFIARVGNDMERIKSELDKLLS
YTLDKDIIEEEDIVAITSISLTNRIFELVKMITNNKIKEALDIYEDLVALKEPSLKIMIL
ITRQFNQLLQIKELMSAGFNEKDIASNLKLNPYVVKNLMRQARGFDMALLLSYVKNAIEL
EEAIKKGNINEKLALELLMLTR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtattaaataatgatttgaaaaattccacattcaaaggcatttatgtactatca
ggtgatgatgaatttttaaaaaacagctataaaaaaagattaaaaatggctatggtaggt
gatgaccaaatgaactatgcctattttgaaggaaaggggatagatgtagacgctattatt
gactttgccaatacgcttccgttcttttcagaatacagatgtattcttatagaagaaagc
caatggtttaaatccggaaacgataagtttttaaactatatttcagataaacccgatagt
acaaaaatcatttttgtagaaaaagaaatcgataagcgttcaaaactctacaaaaaggtc
aaggatatcggatatatcgcagaactcaatcatcctacagatgatgagctgaaaaattgg
gcaggaaatatcataaacaaatccggcaaaaaaatcactgtttccaacatggattttttt
attgccagagttggaaatgatatggaaagaataaagagcgaattggataaattactttcc
tatactcttgacaaagatattatagaagaggaagatatagtagcgataacaagcatcagt
cttaccaacaggatctttgagctggtaaaaatgattaccaacaataaaatcaaagaggcg
ttggatatatatgaagacctggtcgctttaaaagagccgtcactaaaaataatgattctt
atcacaagacagtttaaccaacttttgcaaatcaaggaattgatgtctgcaggttttaat
gaaaaggatatagcatcaaatctgaagcttaatccctatgtagttaaaaatcttatgcgt
caagcccgaggctttgacatggcattgcttttatcctatgtcaaaaatgcaatcgagttg
gaagaagctataaaaaaaggtaatattaatgagaaattagcacttgagttgctaatgctt
acacgttag
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