Lottia gigantea (owl limpet): LOTGIDRAFT_125354
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Entry
LOTGIDRAFT_125354 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K15542
polyadenylation factor subunit 2
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOTGIDRAFT_125354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_125354
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
LOTGIDRAFT_125354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
IKI3
WDR54
Motif
Other DBs
NCBI-GeneID:
20232483
NCBI-ProteinID:
XP_009060535
JGI:
125354
UniProt:
V4BJZ7
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MLFDGKRMRKSVQRKVVDYNSAVFNYMKSRIWQRDVRDARAIQPDGLYQINVEPPLSMLH
NPMNAVTTKFVRQSTNKFRCPIFVLTWTPEGRRLVTGASSGEFTLWNGLSFNFETILQAH
DVSVRAMRWSHNDLWMVTADHAGFIKYWQTNMNNVNMYQGHKEAVRGISFCPSDSKFTTC
SDDGTVRIWDFVRCHEERILRGHGADVKCVDWHPQKTLIASGSKDNQQPLKLWDPRTGNS
LATIHAHKNTVMGLQWNLNGNWLLTASRDHLLKIFDIRNMKDELQQFKGHKKEATVVAWH
PLHEGNFASGGSDGAIMFWEVGCDREVGSMEEAHDGMVWSLAWHPGGHLLASGSNDHSTK
FWSRNRPGDKMRDRYNLNNLPAGYFISDMDVQAVPNLPGMGMEQEAPVKQETDENAIPSI
PGLDFGTDSDVFKQMEAANMPKKKVPYSRPIPKSFEQAW
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttatttgatggtaaacgcatgagaaaatctgtacagagaaaagttgttgattataat
tctgcagtattcaattatatgaagtcacgaatttggcagagagatgtaagagatgctaga
gctatacaaccagatggtttatatcaaataaatgttgaaccaccattgagtatgttacat
aatccaatgaatgctgtaacaactaagttcgtcagacaatctactaataagttccgatgt
ccaatatttgtcttaacgtggacaccagaaggaagacgattagtaactggagcatctagt
ggagaatttacattatggaatggtttatcatttaattttgaaaccattttacaggcccat
gatgtatcagtaagagctatgagatggagtcataatgacctatggatggttacagcagat
catgcaggttttattaaatattggcagactaatatgaataatgttaacatgtatcaaggt
cataaagaagctgttcgtggtataagtttttgcccctcggatagcaagtttacaacctgt
tcagatgacggaactgttcgaatatgggactttgttcgctgccatgaagagagaattctt
agagggcatggtgctgatgttaaatgtgttgattggcatccacagaaaacattgatagct
tctggtagtaaagataatcaacaacccttaaaattatgggatcctagaactggtaatagt
ttagctactattcatgctcataaaaatacagttatgggattacagtggaatctaaatggt
aattggttattaacagcatcaagagatcatctattaaaaatatttgatataagaaatatg
aaggatgaacttcaacaatttaaaggtcacaagaaggaagctacagttgtggcatggcat
ccattacatgaaggtaattttgcaagtggaggatcagatggtgccattatgttttgggaa
gttggatgtgatcgtgaagttggtagtatggaagaagcacatgatggtatggtgtggtct
cttgcttggcatcctggtggtcatttattagcatctggctcaaatgaccattctactaaa
ttctggtctagaaatcgtcctggtgataaaatgagagatagatataatttgaataatcta
cctgctggatatttcatttcagatatggatgtgcaagctgtacctaatctaccagggatg
ggtatggaacaagaagctccagtcaaacaagaaacagatgaaaatgctatccctagtata
cctggtcttgactttggcacagattcagatgtgttcaaacaaatggaagctgctaatatg
ccaaaaaaaaaggtaccatattcaagacccattccaaaatcatttgaacaggcatgg
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