Lottia gigantea (owl limpet): LOTGIDRAFT_179298
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Entry
LOTGIDRAFT_179298 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03015
mRNA surveillance pathway
lgi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOTGIDRAFT_179298
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
LOTGIDRAFT_179298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_179298
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
LOTGIDRAFT_179298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF3915
Motif
Other DBs
NCBI-GeneID:
20244334
NCBI-ProteinID:
XP_009062331
JGI:
179298
UniProt:
V4BDS9
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MGDGVDIDLYANLDEEFTQPEAEFTSHGDDLYDDVITAPSSSDPAEIHNKGDSSTSSTTL
PTTSGFTGKKYMLYVGNLTWWTTDEDLSDAIVSIGVSDLLEVKFYENRANGQSKGFALVS
VGSEASSRLIFEKLARKEFYGQAPQITPYSKQALSNFEAQARKGARPPFTPTGPPPGLPP
HHVPPPRAGPPPRMPPNMMGMPPNRGPPQGPPRGPPPFGQRGPPPRPEWERPPGVGAVPG
MPPGLPPPVSAAPHMGVPPPAPHVNPAFFPPPHSSAPPPGAIPPPIPNAADPYGRPPPTV
YPDPYGRPPPSDRDRERDRERSREREREREPPAPALTEQEFEEIFQRNKTVSSSAINRAV
SDASAGEFASAIETLVTAISLIKQSKIASDDRCKILISSLQDTLHGIEEKSYGSKSQPRR
SRSRDRDRDRDRKERGRSHRSRSREREYRERSRDRERDRYHEDRHRERDRERDRERDRER
EYRRH
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggagacggcgtggatatagatttgtatgcaaatttagacgaagaattcacgcagccg
gaagcagagtttacttcccatggtgatgatttatatgacgatgttataacagcaccatca
agttcagatcctgctgaaattcacaataaaggagatagttctaccagctccaccacactc
ccaacaacttctggttttactggtaaaaagtatatgttatatgttggaaaccttacttgg
tggacaactgatgaagatttgagtgacgctatagtgtctattggagtatcagatttatta
gaggttaaattttatgaaaacagagcgaatggtcagtcgaaaggatttgctctagtgtca
gttggttctgaagcctcatccagattaatatttgagaaattagccaggaaagaattttat
gggcaagctcctcagattacaccctatagtaaacaagcattaagtaattttgaagcacaa
gccaggaaaggtgcacgaccccccttcactccaactggtccacccccaggtctaccacca
catcatgttccaccacccagagcaggtcctccacctagaatgccaccaaatatgatgggc
atgccaccaaaccgaggaccgccacaaggaccacccaggggaccgcctccatttggacaa
agaggacccccacccagaccagagtgggagaggccaccaggagtgggagctgtacccggt
atgccaccaggacttcctccccctgtatcagcagcccctcatatgggagtaccaccccca
gctcctcatgttaatccagctttctttccccctcctcacagttctgcccctccaccagga
gccatacctccccctataccgaatgctgcagatccatatggtagaccaccccccacagtt
taccctgatccttatggccgacccccaccctcggatcgagacagggaaagagacagagag
aggtctagggaaagagaaagggaacgcgagcctccagcgcctgcacttactgaacaggaa
tttgaggaaatattccagagaaataagactgtctcaagttctgctattaacagagccgta
tctgatgccagtgccggagaatttgctagtgctatagagacactagtaacagccatatca
ttaataaaacaatctaaaatagcctcagatgatagatgtaaaatattaatcagttcttta
caagatacacttcatggtatagaggaaaaatcttatggttccaaaagtcaaccgagaaga
tcacgttccagagatcgtgatagggaccgagatagaaaagaacgtggtagaagtcatcga
tctagaagtcgtgaaagagaatatagagagagaagtcgagaccgagagagagatcgctat
catgaagacagacatcgagaacgagacagggaacgagatagagaaagggatagagaacga
gaatatcgtcgtcattaa
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