KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_179298
Entry
LOTGIDRAFT_179298 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K14398  cleavage and polyadenylation specificity factor subunit 6/7
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03015  mRNA surveillance pathway
lgi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    LOTGIDRAFT_179298
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    LOTGIDRAFT_179298
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_179298
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor Im (CFIm)
     LOTGIDRAFT_179298
SSDB
Motif
Pfam: RRM_1 DUF3915
Other DBs
NCBI-GeneID: 20244334
NCBI-ProteinID: XP_009062331
JGI: 179298
UniProt: V4BDS9
LinkDB
Position
Unknown
AA seq 485 aa
MGDGVDIDLYANLDEEFTQPEAEFTSHGDDLYDDVITAPSSSDPAEIHNKGDSSTSSTTL
PTTSGFTGKKYMLYVGNLTWWTTDEDLSDAIVSIGVSDLLEVKFYENRANGQSKGFALVS
VGSEASSRLIFEKLARKEFYGQAPQITPYSKQALSNFEAQARKGARPPFTPTGPPPGLPP
HHVPPPRAGPPPRMPPNMMGMPPNRGPPQGPPRGPPPFGQRGPPPRPEWERPPGVGAVPG
MPPGLPPPVSAAPHMGVPPPAPHVNPAFFPPPHSSAPPPGAIPPPIPNAADPYGRPPPTV
YPDPYGRPPPSDRDRERDRERSREREREREPPAPALTEQEFEEIFQRNKTVSSSAINRAV
SDASAGEFASAIETLVTAISLIKQSKIASDDRCKILISSLQDTLHGIEEKSYGSKSQPRR
SRSRDRDRDRDRKERGRSHRSRSREREYRERSRDRERDRYHEDRHRERDRERDRERDRER
EYRRH
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgggagacggcgtggatatagatttgtatgcaaatttagacgaagaattcacgcagccg
gaagcagagtttacttcccatggtgatgatttatatgacgatgttataacagcaccatca
agttcagatcctgctgaaattcacaataaaggagatagttctaccagctccaccacactc
ccaacaacttctggttttactggtaaaaagtatatgttatatgttggaaaccttacttgg
tggacaactgatgaagatttgagtgacgctatagtgtctattggagtatcagatttatta
gaggttaaattttatgaaaacagagcgaatggtcagtcgaaaggatttgctctagtgtca
gttggttctgaagcctcatccagattaatatttgagaaattagccaggaaagaattttat
gggcaagctcctcagattacaccctatagtaaacaagcattaagtaattttgaagcacaa
gccaggaaaggtgcacgaccccccttcactccaactggtccacccccaggtctaccacca
catcatgttccaccacccagagcaggtcctccacctagaatgccaccaaatatgatgggc
atgccaccaaaccgaggaccgccacaaggaccacccaggggaccgcctccatttggacaa
agaggacccccacccagaccagagtgggagaggccaccaggagtgggagctgtacccggt
atgccaccaggacttcctccccctgtatcagcagcccctcatatgggagtaccaccccca
gctcctcatgttaatccagctttctttccccctcctcacagttctgcccctccaccagga
gccatacctccccctataccgaatgctgcagatccatatggtagaccaccccccacagtt
taccctgatccttatggccgacccccaccctcggatcgagacagggaaagagacagagag
aggtctagggaaagagaaagggaacgcgagcctccagcgcctgcacttactgaacaggaa
tttgaggaaatattccagagaaataagactgtctcaagttctgctattaacagagccgta
tctgatgccagtgccggagaatttgctagtgctatagagacactagtaacagccatatca
ttaataaaacaatctaaaatagcctcagatgatagatgtaaaatattaatcagttcttta
caagatacacttcatggtatagaggaaaaatcttatggttccaaaagtcaaccgagaaga
tcacgttccagagatcgtgatagggaccgagatagaaaagaacgtggtagaagtcatcga
tctagaagtcgtgaaagagaatatagagagagaagtcgagaccgagagagagatcgctat
catgaagacagacatcgagaacgagacagggaacgagatagagaaagggatagagaacga
gaatatcgtcgtcattaa

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