Lottia gigantea (owl limpet): LOTGIDRAFT_184187
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Entry
LOTGIDRAFT_184187 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LOTGIDRAFT_184187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_184187
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LOTGIDRAFT_184187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Utp12
ANAPC4_WD40
NBCH_WD40
WD40_like
RMC1_N
WDR54
DUF5035
PROPPIN
Utp21
Motif
Other DBs
NCBI-GeneID:
20244587
NCBI-ProteinID:
XP_009065252
JGI:
184187
UniProt:
V3ZT99
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MGITKQYLRFEPGDVFGLVGSLKSNIVYLEISRSHGKFCAVGACENVIVWDLKTKEKHLT
LQGEKHEVTIISPCPDKKHLAVGYNDGMVRVFSLISRECICTFSGHKSAVSALNYDAQGL
QLVSGSKDTNVIVWDIVNEAGLYRLKGHKGQITQAVFLRRENVLVSSSKDTYIKFWDLDT
QHCFKTLVTHRSEIYDFVFVSDESRLITGSADSELRVWTINYHGKKLEADEGDDGKKIDL
DTDNIEDDMNILSCTKLGSVIRQSRTHVVSMVTDKHDKVLICHGNDKKLEVFSLPNEEEL
KKRLAKKKKKARLKKSEDPSINEDDVRLEASDYIKQLTQVFLPAKIRSVDFLIGDTEIKL
LSLLTNNSIETSSLDIQEKSSQRADINSHVLPGHRTDVRALCFSSDNTAIVTVSAESAKL
WNRSSVKCIRTMTCEYSVACVFAPGDRHIILGTKSGKLQIFDIASGDLLEDLEAHNGTIY
SISLSPDKRGILTGSADKTVKFWNFEFVQQEKTSSTSKHLTLQHSRTLKMDEEVMCAKYS
PDQRLFAVSLLDNTVKVFFVDTLKFFLSLYGHKLPVLSLDISTDGTLLISGSADRNIKIW
GLDFGDCHKSIFAHDDSIMCVQFVPNTHLFFSGSKDKKLKQWDADSFEHILTLEGHHAEI
WTLAVSTRGNFVATASHDKSLRLWERTQEPLILEEEREMEREKEIDQQVGQSGEPVVAGE
TTNEVGLAGKKSIETVKAAERLMEAIEVYKDESGKLELHEEDCKRTGKQLPKPPKHPLLI
AFNSESPNHYMLDSLKKIKSSELEESLLVMPFSYVTDLLKILDKFLTFGWETELVCRCLF
FLLRVHQGEIISNQILLPIVDRLRTVTSNRVNQLRDQIGFNMAGLQFLKRKLEDRDEVKF
FADATTTRKKKKKKADKVILALKT
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgggtataacaaaacaatatttaaggtttgaacctggtgatgtatttgggttggtagga
agtttaaaatctaatatagtttatttagaaataagtagaagtcatggtaaattttgtgct
gttggagcttgtgaaaatgttattgtctgggatctgaagaccaaagaaaagcatttgacc
cttcaaggagagaaacatgaagtaacaattataagtccatgtcctgataaaaagcaccta
gctgtaggttataatgatggaatggttagagtctttagcttgatctctagagaatgtatt
tgtacatttagtggacataaatcagctgtatcagccttgaattatgatgcacagggactg
caacttgtttctggctcaaaggatacaaatgttatagtatgggatattgttaatgaagct
ggtctgtacagattaaaaggacataaggggcagataacccaagctgtgtttttgagaagg
gagaatgtgctcgttagcagttccaaagatacttacatcaagttctgggatttagacaca
caacattgtttcaaaacattggtcacccatagatcagagatttatgattttgtatttgtg
agtgatgaaagtagattaataacaggatcagctgatagtgaattgagagtatggactata
aattatcatggtaagaaactagaggcagatgaaggtgatgatggtaagaagattgatcta
gatactgataatatagaagatgatatgaatatattgtcctgtaccaaacttggatcagtt
attcgtcagtctagaacacatgtggtgtctatggtaacagataaacatgataaagtttta
atatgtcatggtaatgataaaaaattagaagttttctccttgcctaatgaagaggaatta
aaaaaaagattagctaagaaaaaaaagaaagctagattaaagaaaagtgaagatccttca
ataaatgaagatgatgttagactagaagctagtgattatattaaacaattaacacaagta
tttttacctgctaaaattagatctgtagacttccttattggtgatacagaaataaagtta
ttatcattattgactaataatagtatagaaacaagttcactggatattcaagaaaagagt
agtcagcgtgcagacatcaatagtcatgttttaccaggtcatcgaactgatgtacgggca
ttatgttttagttctgataacactgctatagtaactgtcagtgctgaatcagctaaacta
tggaacagatcatctgtaaaatgtatacgtaccatgacttgtgaatattctgtagcttgt
gtatttgctcctggtgacaggcatattattctgggtactaagagtggcaagttacagata
tttgatatagcatctggtgatttattagaagatttagaagctcataatggaacaatttat
tctatttcactctcaccagataagagaggaattcttactggaagtgcagataaaactgtt
aaattctggaactttgaatttgtacaacaagaaaagacgtccagtacaagcaaacaccta
acattacaacattctagaacattaaagatggatgaagaagttatgtgtgctaaatacagc
cctgatcaaagattatttgctgtttccttactagataatactgtaaaggttttctttgtt
gatacattaaagtttttcctgtcattatatggacataaattaccagtattaagtttagat
atatctactgatggtacattgttaatatctggttctgctgatagaaatattaaaatctgg
ggtttagattttggtgattgtcataaatctatctttgctcatgatgatagtattatgtgt
gtacaatttgtaccaaatacacatctgtttttctctggtagtaaagataagaaactaaaa
caatgggatgctgatagttttgaacatattttgacactagagggtcaccatgcagagata
tggacattagctgtcagtacccgaggtaattttgtagccactgcctctcatgataaatca
ttgagattatgggaaagaacacaagagcctctgattctagaagaagaaagagaaatggaa
agagaaaaagaaattgatcaacaagttggtcagtctggagaaccagtggttgctggagaa
actaccaatgaagttggtttagctggtaaaaaatctatagaaactgttaaagctgcagaa
agattaatggaagctattgaagtctataaagatgaaagtggtaaattagaattacacgaa
gaagattgtaaaagaactggcaaacagctacccaagccaccaaaacatccattattgata
gctttcaacagtgaaagtcctaatcattatatgctagatagtttgaagaaaattaaatcc
agtgaactagaagaatcattattagttatgccattctcttatgtaacagatttactcaaa
atattagacaaattccttacttttggttgggaaacagaattagtttgtagatgtttattt
tttcttctaagagtacatcaaggtgaaataataagtaatcagatattattacctatagtt
gatagattacgtaccgtaacatctaatagagttaaccagttgagggaccagataggtttt
aatatggctggtttacagtttttaaaaagaaaattagaagatagagatgaagtgaaattc
tttgctgatgctactaccacaaggaaaaagaaaaagaaaaaagctgacaaagttattcta
gctttaaaaacttga
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