Lottia gigantea (owl limpet): LOTGIDRAFT_205614
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Entry
LOTGIDRAFT_205614 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03040
Spliceosome
lgi04141
Protein processing in endoplasmic reticulum
lgi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LOTGIDRAFT_205614
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LOTGIDRAFT_205614
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
LOTGIDRAFT_205614
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lgi01009
]
LOTGIDRAFT_205614
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgi03041
]
LOTGIDRAFT_205614
03009 Ribosome biogenesis [BR:
lgi03009
]
LOTGIDRAFT_205614
03110 Chaperones and folding catalysts [BR:
lgi03110
]
LOTGIDRAFT_205614
04131 Membrane trafficking [BR:
lgi04131
]
LOTGIDRAFT_205614
03051 Proteasome [BR:
lgi03051
]
LOTGIDRAFT_205614
03029 Mitochondrial biogenesis [BR:
lgi03029
]
LOTGIDRAFT_205614
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgi04147
]
LOTGIDRAFT_205614
Protein phosphatases and associated proteins [BR:
lgi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
LOTGIDRAFT_205614
Spliceosome [BR:
lgi03041
]
Complex B
Other components
Prp19 complex
LOTGIDRAFT_205614
Complex C
Prp19-CDC5 complex
LOTGIDRAFT_205614
Ribosome biogenesis [BR:
lgi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
LOTGIDRAFT_205614
Chaperones and folding catalysts [BR:
lgi03110
]
Heat shock proteins
HSP70 / DNAK
LOTGIDRAFT_205614
Membrane trafficking [BR:
lgi04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
LOTGIDRAFT_205614
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
LOTGIDRAFT_205614
Proteasome [BR:
lgi03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
LOTGIDRAFT_205614
Mitochondrial biogenesis [BR:
lgi03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
LOTGIDRAFT_205614
Exosome [BR:
lgi04147
]
Exosomal proteins
Proteins found in most exosomes
LOTGIDRAFT_205614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
BcrAD_BadFG
FGGY_C
DUF4795
Pox_D5
ParM_N
Hydantoinase_A
Spore_GerAC
Motif
Other DBs
NCBI-GeneID:
20245852
NCBI-ProteinID:
XP_009051718
JGI:
205614
UniProt:
V4A227
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MTSIGIDLGTTYSCVGVFQHGKVEIIGNDQGNRTTPSYVAFTSSERLIGDAAKNQAALNP
LYTLYDAKRLIGRKFADDTVQRDMKHWPFKVIDDGGKPKFQVKYKHETKVFRPEEISSMV
LTKMKETAEAYLGKTIINAVITVPAYFNDSQRLATKDAGTIAGLNVLRIINEPTAAALAY
GLDKYLSGEKNVLIFDLGGGTFDVSILTIDEGSLFEVKSTSGDTHLGGADFDQRLVDYFV
KEFRKKNKKDMSKNAKAIGRLRNSCERAKRTLSSTTVASIEIDSLFDGVDFYTNISRAKF
EDLCADLFKSTMDPVKKALKDAKMDKKQINEIVLVGGSTRIPKIQKLLQEFMNGRELNKS
INPDEAVAYGAAVQAAILSGDKSEIIKNVLLVDVTPLSLGVETIGGEMNILIPRNTKIPA
EARGMFTTYYDNQTRVYFDVYEGERPLTKDNNLLGDIELSDIPPAKMEVPDIEITFSIDA
DGIMNVSAEDKHTGNSNQITISNNRDRLSQSEIVRLVHEAEMYKEEDSKQLEKVASRNKL
DSYVYSVKPSLEGAVQKLAPKNKELVNKVYDEVVNLLEKIDLEEKEVYEKKLAEVENICY
LLTIKMNVASVGGGGDNLSTVSRS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgacatctatcggtattgatttgggcacaacctattcttgcgtcggagtcttccaacat
ggaaaagtggagatcatcggcaacgaccaaggaaacagaacaacaccaagttatgtggcg
tttactagttccgagcgattaatcggagacgcagcaaagaaccaggcggcattgaatcca
ctttacaccctttacgacgctaaacgtctgattggaagaaaattcgctgatgatacagtc
cagagggacatgaaacattggccgtttaaagtgatcgacgatggcggtaagcccaagttt
caggtaaaatacaaacatgaaacaaaggtctttcgtccagaggaaatcagctccatggtt
ttaacaaagatgaaggaaacagctgaagcctatttgggtaaaacaattatcaacgcagtc
atcacagtcccagcttatttcaacgattctcaaagattagccacaaaagacgctggaact
attgctggattaaacgttctgagaatcatcaacgaaccaacagccgctgccctggcttat
ggactggacaaatatctttctggtgagaaaaatgttctgattttcgatttgggaggagga
acctttgatgtctctatcctgacgattgacgaaggttccttgttcgaggtgaaatctact
tctggagacacccatctcggaggagcagatttcgaccagagattggtggattattttgtc
aaagaattcaggaaaaaaaacaagaaagacatgtctaaaaatgcaaaagctatcggaaga
ctaagaaatagctgtgaacgagctaagagaactctgtccagcaccactgttgccagtatt
gagatcgactcattgtttgacggggtcgatttctacaccaatatatccagagccaagttc
gaagatctatgtgcagatttgtttaaaagtacaatggatccagtaaagaaagctctgaaa
gatgctaaaatggacaagaaacagatcaatgaaatcgttttggtcggaggatcaacaaga
attccaaagatacagaaactgcttcaggagttcatgaatggtagagagctgaataaatcc
atcaacccggatgaagctgttgcttatggagcagctgttcaagctgccatcttgagtgga
gacaagagtgaaatcattaaaaatgtactattagtagatgtaacgcccttgtcccttggc
gttgaaactatcggtggagaaatgaacattttgattccacgtaatactaaaatccctgcc
gaggcacgtggcatgttcacgacatattacgacaaccaaactcgcgtttattttgatgtt
tatgaaggagaacgtccgttgaccaaggacaacaatttactgggagatattgagctgtca
gatatcccacctgcaaaaatggaagttccggacatcgagatcaccttcagtattgatgcc
gatggtattatgaatgtatctgccgaagacaaacatactgggaactctaatcagatcacc
atttctaataacagagatcgtctaagccagagtgagattgtccgactagttcatgaagca
gagatgtacaaagaagaggacagtaaacagttggaaaaagtagcgtctagaaataagctt
gattcttatgtttacagtgtcaagccctctcttgaaggtgcagtccaaaaattggcccct
aaaaacaaggagttagtgaataaagtatatgatgaggtagtaaatttattggaaaaaatt
gatctggaagagaaggaagtatatgagaagaagttggcagaagtcgagaacatctgttac
ctcctcacaatcaagatgaatgttgcatctgttggagggggaggtgataatcttagtact
gtgtccagatcttga
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integrated database retrieval system
