Lysobacter gummosus: LG3211_1535
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Entry
LG3211_1535 CDS
T04163
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
lgu
Lysobacter gummosus
Pathway
lgu02024
Quorum sensing
lgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LG3211_1535 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LG3211_1535 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgu03019
]
LG3211_1535 (hfq)
03036 Chromosome and associated proteins [BR:
lgu03036
]
LG3211_1535 (hfq)
Messenger RNA biogenesis [BR:
lgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LG3211_1535 (hfq)
Chromosome and associated proteins [BR:
lgu03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LG3211_1535 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-ProteinID:
ALN90511
LinkDB
All DBs
Position
1698780..1698983
Genome browser
AA seq
67 aa
AA seq
DB search
MYLVNGIKLQGTIESFDQFVVLLRNTVSQMVYKHAISTVVPARNVRVGPGGGYVQSADGS
DNGEEAE
NT seq
204 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctggtcaacggcatcaagttgcagggcaccatcgaatctttcgaccaattcgtg
gtgctgttgcgcaacaccgtaagccagatggtctacaagcacgccatttccaccgtggtc
cccgcgcgcaacgtccgcgtcggcccgggcggcggctatgtgcagtccgccgacggcagc
gacaacggcgaagaagccgaataa
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