Lysobacter gummosus: LG3211_4074
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Entry
LG3211_4074 CDS
T04163
Symbol
ddlB
Name
(GenBank) ddlB
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu00470
D-Amino acid metabolism
lgu00550
Peptidoglycan biosynthesis
lgu01100
Metabolic pathways
lgu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LG3211_4074 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LG3211_4074 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LG3211_4074 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lgu01011
]
LG3211_4074 (ddlB)
Enzymes [BR:
lgu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LG3211_4074 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
lgu01011
]
Precursor biosynthesis
Amino acid ligase
LG3211_4074 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
GARS_A
ATPgrasp_ST
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ALN93010
LinkDB
All DBs
Position
complement(4569215..4570192)
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AA seq
325 aa
AA seq
DB search
MSSQFAPLRVTDPAVFGRVAVLMGGTSSEREVSLDSGRGVLEALRSRGVDAFAVDGIPAL
IDAIRAGSVDRVFNILHGNKGGGEDGVLQGVLEALGVPYTGSDVLGSALAMDKIRTKQVW
IGAGLPTPKYKRIAKGDDVHAAAQEIGLPVIIKPSSEGSSVGVSRVLKDADIDDAVALAA
RYPGEMLMEQMVIGEELTVAVLINGEGYTALPSIRIVPKGEWYDYHAKYIADDTQYLCPG
LEGEIENEIRRLAMEAFVAAGCKGWGRVDFMRDRTSGQLYLIEVNTAPGMTSHSLVPKAA
RQLGIEYDELCWRVLEATVQGGAVA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcgcagttcgctccgcttcgcgtcaccgatccggcggtattcggccgcgtcgcc
gtgctgatgggcggcaccagttccgagcgcgaggtgtcgctggattccggccgcggcgtg
ctcgaagcgctgcgctcgcgcggcgtggacgcgtttgcggtcgatggcattccggccctg
atcgacgccatccgcgccggcagcgtggatcgcgtcttcaacatcctgcacggcaacaag
ggcggcggcgaagacggcgtgctgcagggcgtgctcgaagcgctcggcgtgccttacacc
ggttcggacgtgctcggctcggcgctggcgatggacaagatccgcaccaagcaggtgtgg
atcggcgccggcctgccgaccccgaagtacaagcgcatcgccaagggcgacgacgtgcac
gcggcggcgcaagagatcggcctgccggtgatcatcaagccgtccagcgaaggctccagc
gtcggcgtgtcgcgcgtgctcaaggacgccgacatcgacgacgccgtcgcgctggccgcg
cgctatcccggcgagatgctgatggagcagatggtgatcggcgaggagctcaccgtggcc
gtgctgatcaacggcgagggctacaccgcactgccgtcgatccgcatcgtgcccaagggc
gagtggtacgactatcacgccaagtacatcgccgatgacacccaatacctgtgtccgggt
ctggaaggcgagatcgaaaacgaaatccgccgcctggcgatggaggccttcgtcgccgcc
ggctgcaagggatggggccgcgtggacttcatgcgcgaccgcaccagcggccagctgtac
ctgatcgaggtcaacaccgcgccgggcatgaccagccattcgctggtgcccaaggccgcg
cgtcagctcggcatcgagtacgacgagctgtgctggcgcgtgctcgaagcgaccgtgcaa
ggaggtgcggtggcgtga
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