Lysinibacillus varians: T479_21475
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Entry
T479_21475 CDS
T03062
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy00470
D-Amino acid metabolism
lgy00550
Peptidoglycan biosynthesis
lgy01100
Metabolic pathways
lgy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T479_21475 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T479_21475 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
T479_21475 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lgy01011
]
T479_21475 (ddl)
Enzymes [BR:
lgy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
T479_21475 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
lgy01011
]
Precursor biosynthesis
Amino acid ligase
T479_21475 (ddl)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AHN23507
UniProt:
A0A806LMZ0
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All DBs
Position
complement(4233049..4234128)
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AA seq
359 aa
AA seq
DB search
MKKRIGLLYGGKSAEHEVSLSTACAVTGALNFEEYEIYPIYITPDGEWRRGERLEKPANS
IEELQFGDDAIILENNITAFLIDKNGAAVQFDVIFPLLHGTNGEDGTVQGLLEVLNLPYV
GNGVLASSAGMDKVIMKQLFEIAGLPQVPYTYFIRSEWTKEQDAILTRCEQKLSWPMFVK
PANLGSSVGISKASNREELIQAIEVALQFDRKIVVEQGIVAREIELAVLGNDFPEVSVPG
EIKPMTEFYDYDSKYKDGSTALIIPAELPTEVVTNLKEHAKSAFKILDGSGLVRADFFVT
ADHAIYINEVNTMPGFTPVSMYPLLWQHTNVSYPELINRLIALALERFEEKQQLHYKKD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaatcggtttattatacggcggaaagtcagcggagcatgaggtgtcattg
tcgacggcgtgcgcagtcactggagctttgaatttcgaggagtatgagatatatccgatt
tacattacaccagatggggaatggcgacgcggtgagcgtttagaaaaacccgcaaattcg
attgaagaattgcaatttggtgatgatgccattattttagaaaataatattacagcgttt
ttaattgataaaaacggggcagcggtccaatttgatgttattttccctttactgcatgga
acaaacggggaagatggaactgtacagggtttactggaagtgttgaatcttccgtatgtc
ggtaatggtgtgttggcatcatctgcaggtatggataaagtgattatgaaacagttgttt
gaaattgcgggcttaccacaagtcccatatacgtacttcatccgtagtgaatggacgaaa
gagcaagatgctattttaacgcgttgtgaacagaaattgtcttggccaatgtttgtaaag
ccagcaaatttaggctcaagtgttggtattagtaaagcttcgaaccgtgaggaactgatt
caagcaattgaggtagcattgcaattcgaccgtaaaattgtggtagagcaaggtattgta
gcacgtgaaattgaattagctgtactgggcaatgattttccagaagtatctgtgccaggt
gaaattaagcctatgacagagttctatgattatgattcaaaatataaggatggttcaaca
gcattgattattcctgctgaactacctacagaagttgtgactaacttaaaagagcacgca
aaaagtgcgtttaagattttagatggaagtggtttagtacgtgctgatttctttgtcacg
gcagatcatgccatttatattaacgaagtaaatacaatgccaggttttacacctgttagt
atgtatccgcttctttggcaacatacaaacgtaagttatccagagcttattaatcgactg
attgcgctagcacttgagcgctttgaagaaaaacaacagcttcactataaaaaagactga
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