Leptotrichia hofstadii: JCM16775_1097
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Entry
JCM16775_1097 CDS
T06149
Name
(GenBank) ABC transporter
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
lhf
Leptotrichia hofstadii
Pathway
lhf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lhf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JCM16775_1097
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lhf02000
]
JCM16775_1097
Transporters [BR:
lhf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JCM16775_1097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
DEAD
TsaE
AAA
AAA_29
Zeta_toxin
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBM38388
UniProt:
A0A510JGH9
LinkDB
All DBs
Position
complement(1122522..1124261)
Genome browser
AA seq
579 aa
AA seq
DB search
MINDIRNIKTLAGNKYKNLKNPIFFLTIDALFYMMNYAMFYFTIIDLMNNNFTMKKLIIY
TFIMIFAIICRFILNRIGYIGIQTEGAKIIQDLRIRMGDHLRNLNLGYFNSHNIGNIINI
MTNDLQDFEQVITHSTSEIIKLSILTIYLLLIIFAISPLLAILQLIISLAGLVFVILGTK
KGAKIALKKKHTMDNVVSRMVEYIAGMELFKAYNLTGERFKRLKDSFNDLKRESINTEIA
LAPYVMIFQLITDISFALLLLVSTQLFMASSINKVEFFSYIIIGLSLSNVLKAFSTQYTF
IQYLKLATDKLINVHNEKEISYELEKVTLPNYNIKFQNVNFSYEKDTPVLKNITFEAKQG
TKTALVGSSGSGKTTVTSLIARFWDCQSGEITIGGINIQKIYPEELLTNISMIFQDVYLV
NDTFENNIRLGKPKATKEEVINAAKNANCHDFIMESENGYDTIIGEGGSTLSGGEKQRIS
IARALLKNTPIILVDEATASLDADNEHEIRKSLSILTKSKTVITIAHKLNTIKDYDKIIV
MSDGIIEEIGNHNQLMKNKGRYYKMYIEMEKAQSEFELI
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgattaacgatattagaaatataaaaactcttgctggaaataaatataaaaatttgaaa
aatccaatattttttctaacaatagacgccttattttatatgatgaactatgcaatgttt
tattttacaattattgatttgatgaataataattttacgatgaaaaaattaataatctat
acttttattatgatttttgcaattatttgtagatttatattaaatcgtatcggatatatt
gggattcaaaccgagggagctaaaattattcaggatttgagaatcaggatgggggatcat
ttgagaaatttgaatctgggatactttaacagtcataacattgggaatattattaatatt
atgacaaatgatttacaagattttgagcaggttataactcacagcacatcagaaattata
aagttatctatactgacaatttatcttctgttaattatatttgcaatttctcccttgctt
gccatactgcaactaataatctcgctggctggattagtatttgtcattctgggaacgaaa
aaaggtgcaaaaatagcattgaaaaagaagcatactatggataatgttgtttcacggatg
gtggaatatatcgctggaatggaactttttaaagcatataatctgactggggaacgattt
aagaggttaaaagacagctttaatgatttgaaaagggaaagtataaatactgaaattgct
cttgccccttatgttatgatttttcagcttattacggatatttcctttgccttgcttctg
cttgtgtctacacaactttttatggcttcttccattaataaagtggaatttttttcatac
ataattattggactttcactttcaaacgtgctaaaagccttttctacacaatatactttt
atccaatacttgaaacttgccacagataagctgataaatgtacataatgaaaaggaaatt
tcctatgaacttgaaaaagttactttaccaaattataatataaaatttcagaatgtaaat
ttttcttatgaaaaagacactcctgttttaaaaaacattacttttgaagcaaaacagggg
acaaaaactgctctagtcggttcatcaggttctgggaaaacaactgttaccagccttatt
gcaagattctgggactgccagtccggtgaaattaccattggtggaataaatatccaaaaa
atataccctgaagagctgcttacaaatataagcatgatttttcaagatgtctacttggta
aatgacacttttgaaaataacataaggctgggaaaaccaaaggctacaaaggaagaagtg
ataaatgcggctaaaaatgccaattgtcacgattttataatggaaagcgaaaatggatac
gacactataatcggagaaggcggctctactttgtctggtggagaaaaacagagaatttca
atcgcaagagccttattaaaaaataccccaattatcctagtcgatgaagccacagcctct
cttgatgccgacaacgaacacgaaataagaaaatcactaagtattcttacaaaaagcaag
actgtaattacaatcgcccataaactcaacacaataaaggattatgacaaaattatagtt
atgtccgatggaataatcgaagaaattggaaatcataatcaacttatgaaaaataaagga
cgatattataaaatgtacatcgaaatggaaaaggcacaatctgaatttgaattaatttaa
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