Laribacter hongkongensis: LHK_01256
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Entry
LHK_01256 CDS
T00884
Name
(GenBank) probable ABC transporter, ATP-binding/permease fusion
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
lhk
Laribacter hongkongensis
Pathway
lhk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LHK_01256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lhk02000
]
LHK_01256
02044 Secretion system [BR:
lhk02044
]
LHK_01256
Transporters [BR:
lhk02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LHK_01256
Secretion system [BR:
lhk02044
]
Type I secretion system
Adhesin protein transporter
LHK_01256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
Peptidase_C39
SMC_N
DUF87
AAA_29
DUF3382
FtsK_SpoIIIE
MMR_HSR1
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ACO74246
UniProt:
C1D706
LinkDB
All DBs
Position
1216944..1219112
Genome browser
AA seq
722 aa
AA seq
DB search
MTATASAKEGGFSFSQRSLATDPLLDCLFSLVRGFGMTATRESLTAGIPLHDNRLTPSMF
ARSARQHGLVTRVLRRDLSQFKASHCPAVLLLENDEACILRGVREGFATVSSSDLPDAAD
EIPLEELAGRYTGIAILVKPRYHFDKRTPELASIRTRHWFWQAIFQCKTLYRDALVAALM
INIFALAIPIVTMNIYDRVVPNMATDTLWVLAIGAALVLVFDFLLKVSRAYLIDRASKRV
DINLSALIMERVLGIRMAARPASVGAFAANLRAFETIRDFIASASVTALIDMPFLLLFMI
VIAWISPWMVLPLLAGAVAMIVYALLMQHKMEELSETTLRASSQRNALLVESLAALETVK
IQGAEGSMQTKWEESTRFLAQVGSRLKVLSTSATNFAGFVQQFNSVAMLVVGVYQIMLGN
LSMGGLIAVVMLSGRAIAPLGQVVGLLTQYHHAKTSLSSLESFMEMPVERDASSPYFHRT
HLKGEIEFHDVSFAYPNSNMGALSHVSFRIHAGERVGIIGRTGSGKSTLQKLILGLFQAD
EGAISIDGIDIKQIDPSELRHHIGHVPQDAVLFYGSLRENIAFGKPHAYDASVAAAAEQA
GLTDFINRHPDGFDMLIGERGESLSGGQRKAVTIARALLESPPILLLDEPTSNMDHASEQ
AIKRTLASVLPGKTLVLVTHHTALLDLVDRLIVIDQGRVVADGPRAEVVRALQGGKIGKA
AV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaacggcgtcggcgaaagaaggcggtttttctttctcgcagcgaagtctggca
accgatcctttgctggattgcctgttctcccttgtgcgcggtttcgggatgacggcgacg
cgtgaatccctgacggccggcattcccttgcatgacaaccggctcacgccgtcgatgttt
gcgcggtcggcgcggcagcatggcctggtgacacgggtactgcggcgtgacctttcgcaa
ttcaaggccagccattgcccggccgttttgctgctggagaatgatgaagcctgcatcctg
cgcggggtccgggaaggcttcgccacggtcagcagttccgatttgccggatgcggcggac
gaaataccgctggaagaactggccgggcgctataccggcatcgccatcctggtcaagccg
cgttaccactttgacaagcgcacgcccgagcttgcctccatccgtacgcggcactggttc
tggcaggcgatattccagtgcaagaccctgtaccgggatgcactggtggcggccttgatg
atcaacatttttgcgctggcgatcccgatcgtcaccatgaacatctacgaccgcgtggtg
cccaacatggcgaccgataccctgtgggtactcgccatcggggccgcgctggtgctggta
ttcgatttcctgctgaaagtctcgcgggcctacctgatcgaccgtgccagcaaacgggtg
gacatcaacctgtcggcgctgatcatggagcgggtactgggcatccgcatggcggcgcgt
ccggcctcggtcggggcctttgctgccaacctgcgggcttttgaaaccatccgcgacttc
atcgcctcggcctcggtcacggcgctgatcgacatgccgttcctgctgctgttcatgatc
gtgattgcgtggatttcaccatggatggttttgcccctgctggccggggcggtggcgatg
atcgtctatgcgctgctgatgcagcacaagatggaagagctgtccgaaaccaccctgcgc
gcctcttcgcagcgcaacgccttgctggtcgagagccttgctgctctggaaaccgtcaag
atccagggggccgaaggctccatgcagaccaagtgggaagagtcgacgcgctttctggcc
caggtgggatcgcggctgaaggtcctgtcgacctcggccaccaacttcgccggtttcgtg
cagcagttcaactcggtcgccatgctggtggtcggggtgtaccagatcatgctgggcaac
ctgtcgatgggggggctgatcgccgtggtcatgctgtctggccgcgccattgctccgctg
ggacaggtagtgggcctgctgacgcaataccaccacgccaagacctcgctgagctccctg
gaaagcttcatggaaatgccggtagagcgcgatgccagttcgccgtatttccaccggacc
catctcaagggggaaatcgaattccacgacgtgtcgttcgcctacccgaacagcaacatg
ggggcgctcagccatgtttcgttccgcatccatgccggtgagcgggtcggcatcatcggg
cgcaccggctcgggcaaatccaccctgcaaaagctcatcctcgggctgttccaggcagac
gaaggtgccatcagcatcgacggtatcgacatcaagcagattgacccgtccgagttgcgc
caccatatcggccatgtgccgcaggatgcggtgctgttctatggcagcctgcgcgagaac
attgccttcggcaaaccccacgcctacgacgccagcgtggctgcggcagccgaacaggcc
ggactgaccgacttcatcaaccgccatcccgacggctttgacatgctgatcggcgaacgg
ggcgaatcactctccggaggccagcgcaaggccgtgaccattgcccgcgccctgctggaa
tctcctcccatcctgttgctggacgaaccgaccagcaacatggaccacgccagtgaacag
gcgatcaagcgcaccctggcttcggtcctgccaggcaagaccctggtgctggtgactcac
catactgccttgctggatctggtcgaccggctgatcgtgattgaccagggacgggtggtg
gccgacggcccccgcgccgaagtggtacgtgccctgcaaggcggcaagatcggaaaggcg
gccgtatga
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