Lactobacillus helveticus R0052: R0052_04280
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Entry
R0052_04280 CDS
T02217
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lhr
Lactobacillus helveticus R0052
Pathway
lhr00240
Pyrimidine metabolism
lhr00250
Alanine, aspartate and glutamate metabolism
lhr01100
Metabolic pathways
lhr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
R0052_04280 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
R0052_04280 (carB)
Enzymes [BR:
lhr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
R0052_04280 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_4
ATP-grasp_5
MucBP_2
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AFR21756
LinkDB
All DBs
Position
739934..743122
Genome browser
AA seq
1062 aa
AA seq
DB search
MPKRTDIHKIMVIGSGPIIIGQAAEFDYSGTQACLALRDEGYEVVLVNSNPATIMTDTTI
ADKVYIEPLTVDSVSRIIRQEYPDAILPTLGGQVGLNMALALAKTGILDELHIELLGTKL
ASIEQAEDREKFKELCQKLGEPVPPSKTVKTVEDALAFGDEIGYPIIVRPAFTMGGTGGG
ICHNHDELAEIAKNGLELSPVTECLIEKSIAGYKEIEFEVMRDSSDNAMIICCMENFDPV
GIHTGDSIVFSPSQTLSDKEYQMLRDCSLKLIRALKIEGGCNVQLALDPNSLDYDVIEVN
PRVSRSSALASKATGYPIAKMAAKIAIGMTLDEIKNPVTGTTYAEFEPALDYVVCKIPRF
PFDKFPKADRVLGTQMKATGEVMAIGRTAEEAMQKAVQSLEIDEKDLYSVKAHKASDDEI
EQKLVRPQDDRLFYLAEAFRRGYSLEDVHELTKINFYFLDVVKHMVEMEKEIEANPDDLD
VLRLAKKYGFSDQTIAKLWHEYPDQVRDLRKANGIVPVYKMVDTCAAEFESTTPYFYSTY
DGENESRKSGKKSVIVIGSGPIRIGQGVEFDYATVHSVKALQKMGYEAIVINSNPETVST
DFSVSDKLYFEPLTLEDVLNVCDLEQPEGVIVQFGGQTSINLAAGLERHGVKILGTTVKD
LDRAEDREEFDQIIKSLHLHQPQGLTATTHEGVMKAADQLGYPVLVRPSYVLGGKAMEIV
YSKDELEEYLHDHADIAEDHPILVDDYLDGRECDVDAISDGKTVLLPGIMEHIEHAGVHS
GDSMAVYPPQTFSDEVKEKITDVTKKLALALNCKGIMNIQFIVRDGDVYVIEVNPRASRT
VPFLSKITGIEMAQVATRVIMGESLEQQGYADGLAPEPAMISVKAPVFSFSKLADVDSYL
GPEMKSTGEVMGSDHTFAKALYKAFAGAKMQLPENGNVLLTIEDRDKEKILPIAKRFARI
GYRIFATKGTANFLKKNDLHVELVTKVHEDEQADDNILNELRDGKIDLVINTMGHDIEKN
SDGFIIRQMAIQQNVPLLTALDTADALLKSLENRSFAIDALK
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagaacagatattcataagattatggtgattggttcaggcccaattattatc
ggccaagccgcagaatttgattattctggtactcaggcatgcttggctttgcgcgacgaa
ggctatgaagttgttttagtcaattctaatccggcaacaatcatgactgacactacaatc
gctgacaaggtttatattgaacctttaacagtagattcagtttctagaattatccgtcag
gaatatccagatgcaattttgccaacactcggcggacaagtgggattaaacatggcttta
gcgctggcaaaaaccggtattttggatgaactccatattgagcttttaggtaccaaactg
gcttcaattgaacaagcagaagaccgtgaaaaatttaaagaactttgtcaaaaattgggc
gagcccgttccaccatctaagacagtcaagacagtcgaagatgccttagcatttggggat
gaaatcggttatccaatcattgtgcgcccagcctttactatgggcggtaccggtggtggt
atctgtcataatcatgatgaattagctgaaattgctaaaaatggtttggaattgtctcct
gtaacggaatgcttgattgaaaaatcaattgctggttacaaggaaatcgaattcgaagta
atgcgcgattcaagtgacaatgcgatgatcatctgctgtatggaaaacttcgatccggtt
ggtattcatactggtgattcaattgttttttcaccaagccaaaccttgtctgataaagaa
tatcaaatgcttagagattgttctttaaaactgattagagcattaaaaatcgaaggtggt
tgtaatgttcagttagcacttgatcctaatagtttggattatgatgtaatcgaagtcaac
ccaagagtttctcgctcaagtgctttagcttctaaagcaacaggttatccaattgccaag
atggctgctaagattgcgatcggcatgactttagatgaaatcaagaacccagtaactggt
actacttatgccgaatttgaaccagcacttgactatgtggtctgcaagattccacgcttt
ccatttgataaattccctaaagctgaccgcgtgttaggaacgcagatgaaggcaactggt
gaagttatggcaattggtcgtacagctgaagaagcaatgcaaaaggctgtgcagtcgctt
gaaattgatgaaaaagatttgtactcagttaaggcacacaaggcaagcgatgacgaaatt
gaacaaaaattggttagaccgcaagatgatagattattttatctcgctgaagcatttaga
cgcggctattcacttgaagatgttcatgaattaactaagattaacttctatttcttagat
gttgtaaagcacatggttgagatggaaaaagaaattgaggcaaatccagatgacttagac
gttttgcgtctagctaaaaaatatggctttagtgatcaaacgatcgcaaaactatggcat
gaatatcctgatcaagtaagagatttgagaaaagctaatggcattgtgccagtttataag
atggttgatacttgtgccgccgaatttgaatcaaccacgccatacttttactccacttat
gatggtgaaaatgaaagtagaaaatctggtaagaaatcagtgatcgttattggctcaggc
ccgatccgcatcggtcaaggggtagaatttgactatgcaacagttcactcggttaaggct
ttgcaaaagatgggctatgaagccattgtcattaactctaatcccgaaactgtttcaaca
gacttctcggtttcagataagctttactttgaaccactgactttagaagatgttttgaat
gtttgcgacttggaacagcctgaaggcgtgatcgtgcaattcggtggtcaaacctcaatt
aacttggcggccggtcttgaaagacatggcgttaaaattttaggaacaacggttaaggat
cttgatcgagcagaagatagagaagaattcgatcagattattaagagcttgcatttgcat
caaccacaaggtttgactgcaacgacgcatgaaggagtaatgaaggcagctgatcaacta
ggctatccagtgctggttcgaccatcttatgttttaggcggcaaggcaatggagatcgtt
tattcaaaggatgaattagaagaatatttgcatgatcacgccgatattgcagaagatcat
cctatcttggtcgatgattatcttgatggacgtgaatgtgatgttgatgcaatttctgat
ggcaagacagtactgcttccaggaattatggagcacattgaacatgcgggcgttcactca
ggtgattctatggcagtctatccaccacaaacctttagtgatgaagttaaagaaaagatt
acggatgtgactaagaaattagctttagctttgaactgtaagggaatcatgaacattcag
tttattgtgcgcgatggggatgtctatgtaattgaggtaaatccacgtgcaagtcgaacg
gtgccattcttgagtaagattaccggtattgaaatggcgcaagttgcaactcgcgtgatc
atgggagaaagtcttgagcagcaaggttatgcagatggtttagctccagaaccagcaatg
attagtgttaaggcaccggtctttagctttagtaaattagctgatgttgattcttacctt
ggaccagaaatgaaatcgactggtgaagtaatgggtagtgatcatacatttgctaaggca
ctctacaaggcttttgcaggtgcaaagatgcagctacctgaaaatggcaatgtccttctt
actattgaagatagagataaggaaaagattttgccgattgcaaagagatttgctcggatc
ggttacagaatcttcgcaactaagggtacagccaacttccttaaaaagaacgacctgcac
gtagaactcgtgacaaaagtacatgaagatgagcaagcagacgataacatcttgaacgaa
ttacgcgatggaaagatcgatttagtaatcaatacgatggggcatgatattgaaaagaat
tcggatgggtttattattagacaaatggcgattcagcaaaatgttccgttattaacagct
ttagatactgcggacgcattactcaagtccctagaaaacagatcatttgctattgatgca
ttaaaatag
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