Linepithema humile (Argentine ant): 105677322
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Entry
105677322 CDS
T04898
Name
(RefSeq) ATP-dependent RNA helicase bel
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105677322
03041 Spliceosome [BR:
lhu03041
]
105677322
03036 Chromosome and associated proteins [BR:
lhu03036
]
105677322
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105677322
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105677322
mRNA cycle factors
Common to processing body (P body) and stress granule
105677322
Spliceosome [BR:
lhu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105677322
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105677322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
105677322
NCBI-ProteinID:
XP_012231289
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MSNAANQNGSGLEQQLAGLDLQGSRQPSGGRYVPPHLRHKAASNPPSDLNYSSNPRPFGD
RDRGGDRDRDRERERDRDRGRGGAYRESRSPRDVDFANFGSFGGRNRRSQENGRDYRYPN
ERDRPISGNDRWQEPRNDRWQENRNDRMGSGGRWGDDRGGRGGARGEVDWTIPTARDERL
ELELFGTGNTGINFSKYEDIPVDATGENIPPHITSFDEVKLTEIIKNSIALAGYDKPTPV
QKYAIPIIIGRRDVMACAQTGSGKTAAFLVPILNQIYESGPRAPPPQANSSGRRKQYPLG
LVLAPTRELATQIYDEARKFAYRSRMRPAVVYGGSNIVDQMRELDRGCHLLVATPGRLVD
MLGRGKIGLHNCRYLVLDEADRMLDMGFEPQIRRIVQEDNMPPTGERQTLMFSATFPKEI
QMLARDFLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLQASNFTDPTAESLT
LVFVETKKGADMLEEYLASMGYPVTSIHGDRTQREREEALRRFRAGKAPILVATAVAARG
LDIPHVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNHKNHNLVRDLVSLLVEAN
QELPPWLDDMFTEARYSGGGSRRPGGGGGGGGGGGGTKGRFSGGGFGARDYRQQPSSGPG
RSNGPSRPGGYGGGYSSYGGNYNNSSYNNSNNNGNSGPDWWGGWDK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgcagccaaccagaatggatcaggtctagagcagcagttagctggtctggac
ttgcagggctcccgccaaccaagtgggggtcgctacgttccaccgcatcttcgtcataaa
gcagcaagtaatccaccttcggatttaaattactcttcgaacccgagaccgtttggtgat
cgagacagagggggagatcgcgatcgcgaccgtgaaagggagcgtgaccgcgataggggt
cgaggaggcgcttatcgagaatcgcgaagtcctcgcgacgtcgatttcgcgaactttgga
agcttcggtggacgtaacaggcgcagccaagaaaatgggagagattatagatatcccaac
gagcgcgatcggccaattagtggcaatgatcgctggcaggaacctagaaacgatcgctgg
caagagaacagaaatgacagaatgggaagtggcggaagatggggagacgacagaggcggt
agaggcggcgcgcgaggcgaggtcgactggactatccccactgccagagatgagagattg
gagctggagctgtttggtactggcaatactgggatcaattttagcaaatatgaggatatc
ccggttgatgctactggagagaacataccaccacacatcacatcatttgacgaggttaag
ctgacagagataataaagaatagcatcgccttggcaggatatgacaagcctacaccagtg
cagaagtatgcgataccgattatcatcgggcgccgtgatgtgatggcctgcgctcaaacc
ggatccggtaaaacagcggccttcctagtgccaatattgaatcagatttacgagagcggg
ccgcgagcgccaccgccgcaagcgaattcttctggcaggcgtaaacagtatccgttgggt
ctagtgctggctccaacgagggagctcgctacgcagatatacgacgaagcgcggaagttc
gcgtaccgatcgcgtatgcgtcccgcggtcgtatatggcggctccaacatagtagatcaa
atgcgcgagttagatcgcggttgccatttactcgtggcgacacctggtcgtctggtggat
atgctggggcgcggtaaaattggtctgcataattgccggtacttggttctggacgaggca
gatcgtatgttggatatgggtttcgagccgcaaataagacgtattgtccaggaggacaac
atgccgccaaccggagagagacagactctcatgttctctgctactttcccgaaagagatt
cagatgctggctagagatttcctcagcaactacattttcttggcggtcggtcgcgtgggc
tcgacttcagagaatatcacgcagaagattgtatgggttgaggagcacgacaaacgttca
tatttacttgatttgctgcaagctagcaactttactgaccctaccgcagagtcacttact
ttagtgttcgtggagacaaagaaaggcgccgatatgctcgaagaatatctggcctcaatg
ggatacccggtcaccagcattcacggtgacagaactcagcgtgaacgtgaggaagctttg
cgccgtttccgcgcgggcaaagcgccgattctggtcgcaaccgcagtggcggcgcgtggt
ctcgatataccgcacgttaagcacgtaatcaattttgacttgcccggcgacgttgaggaa
tacgttcatcgtatcggtcgtaccggtcgtatggggaatttaggtctggctacatcgttc
ttcaaccacaagaatcacaatctagtacgtgacttggtatccctgcttgttgaagccaat
caggaacttcccccatggttggatgacatgtttactgaagcgagatactccggaggcgga
tctcgtcggccgggaggcggcggcggcggcggcggtggcggcggcggcacaaagggtcgc
ttcagcggcggagggtttggtgcaagagattatcgccaacaacccagttctggacctggc
cgtagtaatggcccttctagacctggtggttacggaggcggttattcaagttacggaggt
aactataataattcatcgtacaataattccaataacaatggcaacagtggccccgattgg
tggggaggatgggacaaatag
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