Linepithema humile (Argentine ant): 105678545
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Entry
105678545 CDS
T04898
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105678545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105678545
Spliceosome [BR:
lhu03041
]
Complex A
U1 snRNP components
U1 related factors
105678545
Complex B
105678545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Spherulin4
Motif
Other DBs
NCBI-GeneID:
105678545
NCBI-ProteinID:
XP_012233423
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MASNDGIPAPTAVTGFPSATPNIASSFVPPIMPTAPFIPPPSLPPGPPGIMPPQFSIPPP
GFTFPITAAPPPEAGVIAASPQITAPGIPPPSPIGSDTASSMSISTTEKKTDWSEHKAPD
GRTYYYNNITKQSLWEKPDELKTPSELLLSQCPWKEYKAENGKVYFHNVTTKESRWTIPP
ELEELKTRIIAEEAAAAAAAVVANTTNTNMVPVAIQHLSPNVSTISQTSTPESGGKSAIE
QAMAATLAAINIPTPPTKPDEDSNSAMGSANDSRTSTPEPKMQFKDKKEAVEAFKELLRE
RDVPSNVTWEQAVKLIQTDARYPQMKKLNERKQAFNSYKTQKLKEEREQERLRLKKAKED
LEQFLLINDRMLSTTKYYKCEELFGNLEVWRSVGDSDRRDIYEDVIFNLAKREKEEAKQL
KKRNTKRLAQVLDTMTEVTYRTTWQEAQALLLQHPAFAEDADLLEMDKEDALIVFENHIR
QLEKDEEEEKECEKKRRKRQERKNRDGFIYLLDELHEQGKLTSMSLWVELYPMLSADLRF
SAMLGQSGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEEFATVVCED
RKSATLDAGNVKLTYNLLLEKAEAREKERVKEETRKFKKLETGFKNLLKTLNVDYQMTWE
DVRPKIEEEQDFKAITLESERMRIFKEYQHELEESCSHHHIRSKKKKAKKLKRKSRSRSH
SESDGSEKGLKRKQHKSHSPSIPSPSKSDSSESETRKSKRKKNKKKRGRSHSRSHSRLPS
SEESPEGKRKEEKHRRASVHSEGSVTENNEHHELSEDELEKQRAQLLRELQMQQEEN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatgatggtattccagcacccaccgccgtaacaggatttccatcggcaaca
ccaaatatcgcatctagctttgtaccacctattatgcctacagcaccctttattcctcca
cctagtttaccaccaggtcctccaggtataatgccgcctcagttttccatacctccgcca
ggttttacttttcctatcaccgcagcacctcctccagaggctggagttatagctgcatcg
ccgcagataacagcaccgggaattccccctccttcgcctatcggcagtgacactgcttca
tcaatgtcaatttccacaacagagaagaagactgattggagtgaacacaaagcaccggat
ggcagaacatattattataacaatatcacaaagcaatcattatgggaaaagcctgacgaa
ttaaaaaccccaagtgaactattgttgtcacagtgtccgtggaaagaatacaaagcagag
aatggcaaagtatattttcacaatgtaaccaccaaggagtctagatggacaataccgcca
gaattggaagaattgaaaacacgaatcatagctgaagaagctgcagctgcagctgctgca
gttgtagcaaataccacaaataccaatatggttcctgtagctatacaacacttatcaccg
aatgtgtcgaccatatcgcagaccagtacaccagaatcaggtggtaagtccgcgatcgag
caggcgatggctgctacacttgcggcgattaatatcccgacaccgcccaccaagccggat
gaagacagtaattctgcgatgggctcagctaacgatagtcgcaccagcacgcctgagcca
aaaatgcaatttaaggataagaaagaagcagtcgaggcatttaaggaactgctaagggaa
agagacgtgccatcgaatgttacatgggaacaagcagttaaattgattcagactgatgct
agatatccgcagatgaagaaattgaatgaacgtaaacaggctttcaattcatacaaaaca
caaaagctgaaggaagagcgcgagcaagagagacttaggttgaaaaaggccaaggaagat
ttagaacaattcttgttgataaacgatagaatgttgagcacgaccaagtattacaagtgc
gaagagctgttcggtaatctggaagtttggagatcggttggtgattcggatcgccgagac
atctatgaggatgttatctttaatctggcgaaacgcgagaaagaggaggcaaagcagttg
aagaagaggaataccaagagactggcgcaagttctcgatacaatgaccgaggtgacgtac
agaaccacgtggcaggaggcgcaagcattattgttacagcatcccgcgttcgcggaagat
gcggatttattagaaatggacaaggaggacgccttgattgtgtttgagaatcatattcgg
cagttggagaaggacgaagaggaagaaaaggagtgcgaaaagaaacgtaggaaacggcaa
gaaaggaagaatcgggatggctttatatatctactcgatgagcttcacgaacaagggaag
ctcacatcaatgtcactttgggtagaactgtatcctatgctgtccgccgatcttcggttt
tcggctatgcttggtcaatcgggctcaactcctttagatcttttcaaattctacgtcgaa
gatttgaagtcccgattccacgacgaaaaaaagattatccgtgaaatactcaaagacaag
aactttgaagtgcaagttaacacgactttcgaggaatttgccacggtcgtatgcgaggat
cgaaaatcagctactctggatgcaggtaatgttaaattgacatataatttgttgctagaa
aaggcggaagcgcgcgagaaagaacgtgtcaaggaagagacaagaaaattcaagaagttg
gagactggtttcaagaatttgctcaagacactgaatgtagattatcaaatgacatgggag
gatgtgaggccgaaaatcgaggaggaacaagacttcaaggcaattactttggagagtgaa
agaatgcgaatatttaaagaatatcagcacgagcttgaagagagctgtagtcatcatcac
attagaagtaaaaagaagaaggcaaaaaaattgaaacgtaaatcacggtcgcgttcacac
agtgaatcagacggcagcgagaaaggcttgaagagaaaacagcataagtcacattcaccc
agtattcccagccccagtaaatctgacagttccgagtcagaaacaagaaaatccaagagg
aaaaagaataagaaaaagagaggccgtagtcattctcgctcgcattcaagattaccatct
tccgaggaatcgccggaaggaaaacggaaagaggagaaacatagaagggcttcggttcac
agtgagggttctgttacagaaaataatgaacaccatgagctttccgaagatgagttggaa
aagcaaagggcgcaactcttacgcgagcttcaaatgcaacaggaggagaactaa
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