Linepithema humile (Argentine ant): 105679593
Help
Entry
105679593 CDS
T04898
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105679593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lhu04121
]
105679593
Enzymes [BR:
lhu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105679593
Ubiquitin system [BR:
lhu04121
]
Ubiquitin ligases (E3)
HECT type E3
105679593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Maestro_HEAT
Motif
Other DBs
NCBI-GeneID:
105679593
NCBI-ProteinID:
XP_012235132
LinkDB
All DBs
Position
Unknown
AA seq
2075 aa
AA seq
DB search
MADQQDQSSSGGSVEKASASADTSKPKGKSSSSGSSGYRKRQSTGAISDTVEEKRRRQAT
GESASQVDGNTAHTHSIDSSKGEGRIRGERRNHGTGLESYPADSDWRSQHKIHQANYSGS
GSGTRVRSAARTNLAELNLTPTDCVASRTRSRTPQNPQALTQGTSSYDLSLSSGYGSRKT
STYNNLVTSSSVTSITSHPSTSRGRGGQRMSECLEGFVSAVKALFPISTQTYHQEDTKSH
GGATCSTTSSSTSSQVLGVKSSIRVGNTASNSVESGGGALAHDGAGTSGIASTATINPPV
SAAASANLAHPHSTHKHLLRSRAKASGEQPKELPSSNKTSGKHHKKDSTTGSCSSSRHRS
SSRVRKPVVESSSGGLSSVMSGNDSISATSVSSSAPSSQLISTTGEEESASTATSATAGG
GPSGMSGTTGDSESDDGEVGRLQALLEARGLPPHVFGALGPRMQHLLNRGMGTSSAAKAQ
QLLAGLQAVEDEGEQLQAVMNMGEILVMGNEDTLTGFPVKQVVAALINLLGVDNFAIMTH
ACRALTYMMEALPRSSTVVVDAVPVFLQKLESIECMDVAEQCLTALAMLSRRHSKTILHA
GGVSACLKFVDFFNITAQRAALTITANCCQNLHPDDFHLVADSLSLLTSRLTNQDKKSVE
CVCQAFSRLVESFQHDPVMLHKIVNAELLQNLQQLLMITPPVNNTNNFITVLRMLSVISN
RCPDLAQLLLQQNIAFTLSYLLTGSLEVKTEDVELVPHTPQEWFEITCLIEELMPPLPTD
GIFSVNSLLERTSNQQETVQWEWRDERQCSHPFSTIDSRIIEMAFQNGEDEICLSSLGRT
YTIDLTVMKQINEDGGMARSIFRRVNANPTEGKSPTCSSSMDVVPPVIETNEWLVSFIRT
LFSVLYEVYSSSAGPAVKCKCLRALLRMVYYASTDLLKDVLKNQVVSSHIAGMLASQDLR
IVIGALQMASILMKRLPQVFGVHFHREGVLHQVRQLADPEVPLGVSPPKCPSGTSLPSPQ
PGPSNIPLSSTAMLSSSSATSPVVSPSSNGNILFGTIASSCQYKPNIGASLEPHRTELNS
SIEESSTPQSAHLRIGDVLKRKRQNKKSRFSRLGGATTPQQAQQPESLFTGFTPKNNRFL
GNLNPAKWGRKSSSSNTNSDKRDSSSSTNLSKPPSNPSLTGGNRDKAKAWVREQAAQFLA
RYQDDAPCSHPALTVLARLTAAIQRLQSNELDEMLSALTELRDIVLESDISPFEMNYSGL
IKALLNYLTTTDAPGNRYDRLRMFWKLFAESTMQQNNDIMDLNPGAFGALVAKLNSCVAQ
LEQFPVKVHDLPAGSGAGRGGTSALKFFNTHQLKCNLQRHPDCNNLKQWKGGTVKIDPLA
LVQAIERYLMVRGYGRIRDADSMVSDDDNSEDDIDDTLAAVVISQGSAKHKLQFLIGDIV
LPFNMTVYQAVRQFGCSGVDHSEAEADSEPPLGHDAVWVQTHTIYYRPVPEEDAVTCPKS
GSSSQGNSRKGKGKSTKISSKRKEDSLWLEGTVPSQQCPLAPYLSPTLPPSVTITDASLD
GLCLLRLLHALNRHWGILFPHLKSMNLLSSQDFINNKIAAKASRQLQDPLVIMTGNLPSW
LQQIATVCPFLFPFETRQLLLYATSFDRDRALQRLLDSAPELSGSDSQERVTPRLERRKR
TISRTDILKQAEQVIQDLASSKALLEVQYVNEVGTGLGPTLEFYALVSKELQRADLDLWH
GSSNPAENGYINPAHGLFPSPIPWNTKVSHLAKLKTKFKFLGKFMAKAIYDSRMLDLPFS
LTFYRWLLGEEHTLTLADLAHVCPDVHRTLGKLQEVVRRKEVMEKDQTLRPLEKAQLIEV
LDLDTCPISDLGLVFELPGYENIELRKGGSEIPVTIHNLDQYIKLVVHWFLYEGVFRQME
AFREGFESVFPPSQLRLFFPEELEAVFCGHAQTGGQWDVKTLAECCRTDHGYTPDSRAIR
FLFEVMSKYNSEEQRQFIQFVTGSPRLPVGGFKSLTPPLTIVRKTFDPSMKTDDFLPSVM
TCVNYLKLPDYTTLEIMREKLRIAAQEGQHSFHLS
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaacaagatcagtcatcatcaggggggtctgtagagaaggccagtgcttca
gcagacacctctaaacctaaggggaaaagctctagtagtggctcgagtggctatagaaaa
cgacaaagtactggtgcaatctcagatacggttgaagagaagagacgtagacaggccact
ggtgaatcagcatctcaagttgacggtaacacagcgcacacacattcgattgattcttcc
aagggagagggtagaatcagaggtgaacgaagaaatcatggcactggcttagaatcttat
ccagcagattccgactggagatcacaacataagattcatcaagccaactatagcggtagt
ggtagcggtacaagggtgcgtagtgcagcaaggacgaatttggcggagttaaatttaaca
cctaccgattgtgtggcatcacggactcgctctcgtacaccacaaaatccacaagcattg
acacagggaactagcagttacgatctatcgttgtccagcggatacggtagccggaaaaca
agtacctacaacaacttagtaacttcatcgagtgtgacatcgatcactagtcatccatcc
acatcacgaggaagaggaggccagaggatgagcgaatgtctggaaggatttgtgtctgct
gtcaaagcactttttccaatatcaacacaaacctaccatcaagaagatacaaaatctcac
ggcggtgcgacctgtagcacaacgagtagcagtacgagtagtcaagtcttgggtgtcaag
tccagcatcagagtgggtaacacagcaagtaactctgtggagagtggtgggggtgcgttg
gcacatgacggggcaggcacgagtggtatcgcgtcgacggccactatcaatccacctgtg
tctgccgccgcttctgccaaccttgcacaccctcattctacacacaagcacctgctacgt
tctcgcgcgaaagcttcgggcgaacaacccaaggaactgccatcgagtaacaaaacttcg
ggaaagcatcataagaaagactcgaccacgggttcctgctcgagttccagacatcgctcc
tcatcgcgcgtgaggaagccagtggttgagagcagctcaggcggattgagcagtgtgatg
tcaggcaatgattccatcagcgctacatcggtctcatcctctgctcccagcagtcagtta
atctcaaccacaggtgaggaggagtcggcatcaactgctacatccgccacagccggtggg
gggccgtccggaatgtcaggaacaactggtgacagtgaaagcgacgatggagaggttgga
cgactgcaagctctgctcgaagctagaggtttgccacctcatgtgtttggtgcgctgggc
ccgcgaatgcagcacttgcttaacagaggcatgggtacaagttctgctgctaaggcgcaa
caattgttagctggcttacaagctgtggaggatgaaggagagcaattgcaagctgtcatg
aatatgggagagattcttgtgatgggcaatgaagatactttaacaggtttccctgttaaa
caagtggtcgcagctttaattaatctactgggcgttgacaattttgcgataatgacacac
gcatgtcgtgctcttacgtatatgatggaggcattgccacggtcgtctaccgttgtcgtg
gacgcagtgccggtattcttgcagaaactcgaatcgatcgaatgcatggatgttgccgag
caatgtctgacagcgttagccatgttgtcgcgcaggcatagcaaaacaattttgcacgca
ggtggcgtgtcggcatgtttgaaatttgtcgactttttcaacatcaccgcgcaacgtgcg
gcgttaacaattaccgcgaattgctgtcagaatcttcatcccgatgattttcatttggta
gctgatagtttatcgttattgacgagcagattgacgaatcaagataagaagagcgttgag
tgcgtgtgtcaagcattcagccgattggtcgagagtttccaacacgatcctgtgatgttg
cataaaattgtcaatgccgaactcttacagaacttgcaacagctgcttatgatcactccg
ccggttaacaacactaacaatttcataactgtattacgaatgctctctgtgatatcgaat
cgctgtcccgatctggcacagttattgctgcaacaaaacatagctttcacattaagttat
ctcttaactggatctctggaagtcaaaacggaggatgtggaattggtaccacacacaccg
caggagtggttcgaaattacatgtttaatcgaggaacttatgcccccattgccgacagat
ggaatattcagtgtaaatagtttgctcgaaagaaccagcaaccaacaggagactgttcag
tgggaatggcgcgacgagagacaatgctcccatccgttcagtactatagattctagaatt
atcgagatggcgttccaaaacggcgaagacgagatatgcctttcctctttaggacgaact
tacactatagatctgactgtgatgaaacaaattaacgaggatggaggaatggcaagaagt
atatttcgcagagtgaacgccaatcccactgagggaaagagtcctacttgctcatctagt
atggatgtcgtgcctcccgtaatcgaaacaaacgaatggctagtgtcttttattcgaact
ttattctctgtgctgtatgaagtttacagcagctcggctggacccgctgtgaagtgcaaa
tgtctgcgagccctccttcgtatggtgtattatgcttcaactgatttacttaaggatgtt
ctaaagaatcaagtggtttcgtcgcatatagctggtatgctagcgtcgcaagatttacgc
atagttattggggctcttcaaatggcgagtatcttgatgaagagactgccgcaagtgttt
ggggttcattttcatcgcgaaggcgtactgcatcaagttcgtcaattagcagatcccgaa
gtacctctcggtgtttcaccacccaagtgcccttctggtacatcattaccaagcccgcag
ccaggtccgtctaatataccactttcttccaccgcaatgttgtcttctagcagtgccacg
tctccggttgtctctccatcctcgaacggcaacatattgtttggcactatcgcgtcatca
tgccagtataaaccaaatatcggtgcttcgctggagccacatagaactgaattgaacagt
agtatagaagaatcaagtacaccacaaagtgctcacctaagaattggtgacgtgctgaag
aggaaacggcagaacaaaaagagtcgtttctcaagactgggaggcgccaccactccgcag
caagcgcaacagccggaatctctgttcaccggtttcactccgaagaataatcgatttttg
ggaaatctcaacccggccaagtggggacggaaatcgtcttcgtccaataccaacagcgat
aagagggactcgagttcgtccacgaacttgtcgaagccgccgagcaatccaagcttaacc
ggcggcaatcgggataaggcgaaggcgtgggtgcgcgagcaagcggctcaatttctagcc
agatatcaagacgacgctccttgttcacatcccgccctgacggttcttgctagattgact
gctgcaatacagcgattgcaatcaaatgaattggacgaaatgttgtcagcgctaacggaa
ttacgggacatagttctcgagagcgatatatcacccttcgagatgaattacagcggtctt
atcaaagctctgttgaactacctcactaccacggacgcaccgggcaatcgttacgaccgt
cttcgtatgttttggaaattgttcgcggagtctactatgcaacagaacaacgatattatg
gatctgaatcctggagcttttggcgctttagtggcgaaattaaacagctgcgttgcacag
ttggaacaattcccggtgaaggttcacgacttacccgcgggttctggcgctggtcgcggt
ggcaccagcgccctcaagttcttcaatacgcatcaacttaagtgtaatcttcaacggcac
ccggattgtaataacttgaagcagtggaagggcggcaccgtgaaaatagatccacttgcg
ttagtgcaggcaatcgaacgttatttgatggtacgtggatacggtagaatacgagacgca
gactcgatggttagcgacgacgataacagcgaagatgatattgatgatactttggcggca
gtcgtgataagtcagggatcggccaagcataaacttcaattcttaattggcgacatagtt
ttacctttcaatatgacggtttatcaggctgttaggcagttcgggtgttccggagtggat
cactccgaggcagaagctgacagtgaaccgccgttaggacacgacgcagtatgggtgcaa
actcacacaatatactacagacctgtgccagaagaggacgctgtaacttgtccaaaatcg
gggtcgagctcgcagggtaatagcaggaagggcaagggaaaaagtacaaagattagttcg
aagaggaaagaggacagtctctggctggaaggcacggttccatctcagcaatgtcccctc
gcgccgtatctatctcccacgttaccgccgtcagtgaccatcacggacgcatctctcgac
ggattgtgtctacttcgacttttgcacgctctcaatcgtcactggggcatactgtttcct
cacctgaagagcatgaacttactctcatctcaagacttcatcaacaacaagatcgccgcg
aaggccagtaggcagttgcaggatccattggtgatcatgactggaaatttgccctcctgg
ttacagcagatcgcgaccgtctgtcctttcctctttccgttcgagacgaggcagctcttg
ttgtacgcaacatcattcgaccgagatagagctttgcaacgcctcttggattccgcgccg
gaactctcgggctcggatagccaggagcgcgttacgcctcgtttggaacgaagaaagaga
accatctcgcgaacggatattcttaagcaagccgagcaagtgattcaagacttggcctcc
agtaaggctttacttgaagtgcaatatgtcaacgaggtcggtaccggtctcggtccaaca
ttagaattttacgctctagtctcaaaggaactgcaacgagctgatctagatctgtggcac
ggcagttccaatcctgcggaaaacggatacatcaatcccgcgcacggactcttcccatcg
ccgattccgtggaacactaaagtatcccatctagccaaattgaaaactaaattcaaattt
ctggggaaatttatggcaaaggcgatatacgattccagaatgttggacttgccgtttagt
ttaactttctaccgctggttgctgggagaggagcacacgctcacgctggcggacttggca
cacgtgtgtcccgacgtgcatcgcactctcggcaagcttcaggaggtcgtgaggaggaag
gaagtcatggagaaggatcagactttacgaccgcttgaaaaagcgcagttaatcgaagta
cttgacttggacacgtgcccgatctccgatttgggtctcgtgttcgagttgccgggttac
gagaacatcgagttgagaaaaggtggcagtgagatacccgtcactattcacaatctagat
caatacataaagttggtggtgcactggttcttgtacgaaggagtattcagacaaatggag
gcttttcgagaaggattcgaatctgtattccctccgtcgcagctgagactgtttttcccg
gaggagctcgaggcggtgttctgcggacacgcgcaaaccggcggacaatgggacgtgaaa
actctcgccgagtgctgcaggaccgaccacggctacacgcccgactcccgcgccattcgt
ttcctcttcgaagtcatgtccaagtacaacagcgaggagcagcgacaattcattcagttc
gtcaccggttcaccgcgcttacccgttggaggtttcaaaagcttaacacccccgttaacg
atagtacgcaaaacctttgatccgtctatgaagacagacgattttttaccatccgtaatg
acttgcgttaactatctaaaactgcctgattataccactttggaaataatgcgggaaaag
ttacggatagctgcgcaagaaggtcaacactcgttccacctctcctag
DBGET
integrated database retrieval system
