Lysobacter helvus: LYSHEL_02240
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Entry
LYSHEL_02240 CDS
T07483
Symbol
fadB_1
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
lhx
Lysobacter helvus
Pathway
lhx00071
Fatty acid degradation
lhx00280
Valine, leucine and isoleucine degradation
lhx00310
Lysine degradation
lhx00362
Benzoate degradation
lhx00380
Tryptophan metabolism
lhx00410
beta-Alanine metabolism
lhx00640
Propanoate metabolism
lhx00650
Butanoate metabolism
lhx00907
Pinene, camphor and geraniol degradation
lhx00930
Caprolactam degradation
lhx01100
Metabolic pathways
lhx01110
Biosynthesis of secondary metabolites
lhx01120
Microbial metabolism in diverse environments
lhx01200
Carbon metabolism
lhx01212
Fatty acid metabolism
Module
lhx_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LYSHEL_02240 (fadB_1)
00650 Butanoate metabolism
LYSHEL_02240 (fadB_1)
09103 Lipid metabolism
00071 Fatty acid degradation
LYSHEL_02240 (fadB_1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LYSHEL_02240 (fadB_1)
00310 Lysine degradation
LYSHEL_02240 (fadB_1)
00380 Tryptophan metabolism
LYSHEL_02240 (fadB_1)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LYSHEL_02240 (fadB_1)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LYSHEL_02240 (fadB_1)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LYSHEL_02240 (fadB_1)
00930 Caprolactam degradation
LYSHEL_02240 (fadB_1)
Enzymes [BR:
lhx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LYSHEL_02240 (fadB_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LYSHEL_02240 (fadB_1)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LYSHEL_02240 (fadB_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
Pyr_redox_2
ApbA
UDPG_MGDP_dh_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
BCT94353
LinkDB
All DBs
Position
220351..222402
Genome browser
AA seq
683 aa
AA seq
DB search
MLAGLDGLRFQHWRVESAADGVLVLSFDRAGQGVNTLSQDVLFELDALLERLALDPPKGL
VIRSAKVAGFIAGADIKEFQAFDEKGTVGDAIRRGQQVFQRLAELRCPTVAAIHGHCMGG
GTEIALACRYRVATNDPSTRIGLPEVKLGIYPGWGGSVRLPRLVGAPAAFDMMLTGRTLS
ASAARAMGLVDKVVEPAMLTDAAVELARRGTTRPFKQRALAWLTNTWPARQILAPMLAKQ
VARKARREHYPAPYTLIETWRRSGGGIQSLLGAERKSVVKLASTPTARNLIRVYFLQERL
KGLGGKDHGIVCVHVVGAGVMGGDIAAWSAYKGFEVTLADREQRFIDRALQRAQDMFAKR
IKDAARRPAVAARLRGDLHGDGVQTADLVIEAIIEQPEAKRALYAEVEPRLKPDALLTTN
TSSIPLTELRGHIAHPERFAGLHYFNPVALMPLVEIIHHDTMAEETGKRLAAFCRAIDKL
PVPVAGTPGFLVNRVLFPYMLEAMAAYAEGIPGPEIDKAAVKFGMPMGPIELVDTVGLDV
AAGVGHELAPFLGLSIPPGLENKLASGKRGKKDGQGFYAWEEGKPRKPELPKDYKAPDDL
EDRLILPLLNEAVAALHDGVVADADLLDAGVIFGTGFAPFRGGPIAYIRATGADVLLAKL
KALQAVHGDRFAPRPGWDSPQLR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctggactcgatggtctgcgcttccagcactggcgcgtcgaaagcgcggccgac
ggcgtgctggtgctgagcttcgaccgcgccggacagggcgtgaacacgctgtcgcaggac
gtgctgttcgaactggacgcgctgctggaacggctggcgctggatccgccgaagggcctg
gtgatccgctcggccaaggtcgccggcttcatcgcgggcgccgacatcaaggaattccag
gccttcgacgagaagggcacggtcggcgacgcgatccgtcgcgggcagcaggtgttccag
cggctggccgaactgcgctgccccacggtcgccgcgatccacggccactgcatgggcggc
ggcaccgagatcgcgctggcctgtcgctatcgcgtcgccaccaatgatccctccacgcgc
atcggcctgcccgaagtgaaactcggcatctacccgggttggggcggcagcgtgcgcctg
ccgcggctggtgggtgcaccggcggcgttcgacatgatgctgaccggccgcacgttgtcg
gcttccgcggcgcgcgcgatgggcctggtcgacaaggtggtcgaaccggcgatgctcacc
gacgcggccgtcgaactcgcgcgccgcggcacgacgcgtccgttcaagcaacgcgcgctt
gcatggctcaccaacacgtggcccgcgcgacagatcctcgcgccgatgctggccaagcag
gttgcgcgcaaggcgcgtcgcgaacactaccccgcgccttacacgctcatcgaaacctgg
cggcgcagcggcggcggcatccagtcgctgctcggcgccgaacgcaagtccgtcgtcaag
ctcgcgtccacgcctaccgcgcgcaatttgatccgcgtgtacttcctgcaggaacgcctg
aagggcctgggcggcaaggaccacggcatcgtgtgcgtgcacgtcgtcggcgccggcgtg
atgggcggcgacatcgcggcgtggtcggcctacaagggcttcgaggtcacgctggccgat
cgcgaacagcgtttcatcgaccgggcgttgcagcgcgcgcaggacatgttcgccaagcgc
atcaaggacgccgcgcgacgtcccgcggtcgcggcgcgcctgcgcggcgacctgcacggc
gatggcgtgcagaccgcggacctggtgatcgaagcgatcatcgagcaacccgaggccaag
cgcgcgctctacgccgaagtggaaccgcgcctcaagcccgacgcgctgctcaccaccaac
acctcgtcgattccgttgaccgaactgcgcggccacatcgcgcacccggaacggttcgcc
ggcctgcattacttcaacccggtcgcgctgatgccgctggtggaaatcatccaccacgac
acgatggccgaagagaccggcaagcgcctggccgcgttctgccgcgcgatcgacaagctg
ccggtgccggtggcgggcacgccggggttcctggtcaaccgcgtgctgttcccctacatg
ctcgaagcgatggccgcgtacgccgaaggcatcccggggccggagatcgacaaggccgcc
gtgaagttcggcatgccgatggggccgatcgaactcgtcgataccgtcggcctggatgtc
gccgcgggcgtgggccacgaactcgcgccgttcctcggtctgtcgatcccgccgggcctg
gagaacaagctcgcgtcgggcaagcgcggcaagaaggacggccagggcttctacgcgtgg
gaagaaggcaagccgcgcaagccggaactgccgaaggactacaaggcgcccgacgacctc
gaggatcgcctgatcctgccgttgctcaacgaagccgtcgccgcgctgcacgacggcgtg
gtggcggatgcggacctgctggatgcgggcgtgatcttcggcacagggttcgcgccgttc
cgcggcggcccgatcgcctacatccgcgcgacgggcgccgacgtgctgctggcgaagttg
aaagcgttgcaggccgtgcacggcgatcgattcgcgccgcgccccggttgggattcaccg
caactgcgctga
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