Legionella israelensis: E4T55_01175
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Entry
E4T55_01175 CDS
T05938
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
lib
Legionella israelensis
Pathway
lib03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
E4T55_01175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lib03400
]
E4T55_01175
Enzymes [BR:
lib01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
E4T55_01175
DNA repair and recombination proteins [BR:
lib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
E4T55_01175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
QBS11023
LinkDB
All DBs
Position
complement(275788..276714)
Genome browser
AA seq
308 aa
AA seq
DB search
MLATLTKDYFSDPEWLYERKLDGERCLLYKKNGEVKMISRNEKLQNDYYPEISKALNDFP
GDFILDSELVTFDGKITSFSKLQNRMHVKHPSEELIKKYPVYAYVFDILYLDDYSLQELP
LRKRKFILKNAFSYHSFLRYLPHRNKEGEKYLKKACDKGWEGIIAKDANSEYVHSRSKKW
LKFKCAHEQEFVIGGYTAPQGSRIGFGALLIGYYEDDDLKYAGKVGTGFDDDMLEFLHEH
MKKRQTDHCPFSHCSESEDDVTWIKPELVAEVAFTEWTNADKLRHPRFKGLRKDKDAREV
HREVTNGG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaaccctgacaaaggattatttttctgatcccgaatggctctatgaacgtaag
ctcgatggggagcgttgccttttatataaaaaaaacggggaagtgaaaatgatttcacgg
aatgaaaaactgcaaaatgattattaccctgaaatcagtaaggccttaaatgattttcct
ggcgattttattcttgacagcgagctggtcacatttgatggaaaaataaccagcttttca
aaattacaaaatcgtatgcatgttaaacatccaagcgaagaattaataaaaaaatatccg
gtatatgcttatgttttcgatattttgtatctggatgattatagcctgcaagaattgccc
ttacgtaaaagaaaattcattttaaaaaatgcgttctcctaccattcatttcttcgttat
ttgccgcatcgcaataaagaaggggaaaaatatttaaagaaagcttgtgataaaggctgg
gagggcattattgccaaagacgcaaacagtgaatatgtccatagccgttctaaaaaatgg
ttaaagtttaaatgtgcgcatgaacaggagtttgtgataggggggtatacggctccacag
ggaagccgtatcggctttggagcacttctgattggttactatgaagatgacgacttaaaa
tatgccggaaaggtaggtaccggatttgatgatgatatgctggaatttttacatgaacac
atgaaaaaacgccagactgatcattgtccttttagtcactgttctgagtcagaagatgac
gtcacctggattaaaccagagctagtcgcagaagtagcctttacagagtggacaaatgcc
gacaaattacgtcatccgcgttttaagggtttgcgtaaggataaggacgccagggaagtt
catcgggaggttaccaatggcggataa
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