Lactobacillus iners: GYK47_01420
Help
Entry
GYK47_01420 CDS
T08045
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lid
Lactobacillus iners
Pathway
lid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYK47_01420 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lid03400
]
GYK47_01420 (mutM)
Enzymes [BR:
lid01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GYK47_01420 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GYK47_01420 (mutM)
DNA repair and recombination proteins [BR:
lid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYK47_01420 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QIC18279
LinkDB
All DBs
Position
324498..325328
Genome browser
AA seq
276 aa
AA seq
DB search
MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILAIDRYGKYL
LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQKHEHVQFTFSDNTYLRYDDVRKFGRMQLIE
TGTERINTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQSIVCGLGNIYTDEVL
WQSKIHPLSIANKIAQDSLVELFYDINNTIKIAIQYHGTTFHSFLDADGHTGKYQSMLKV
YGKSGEPCSRCNTTLEKIKVNGRGTTFCPLCQVVYK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaatgccagaggtagaaacagttcgtcgtacgttggagccactgattaaggga
aaaattataagtaatgtaacaatttggtatgataaaatcattgtgaatgatgccgatttt
tttcaaagaaaagtagtaggtcaaaaaattttggctatagaccgatatggtaaatatctt
ttaataagattaactaataatctgactatagtttcacatttgcggatggaaggcaaatat
cattttttagatagtgatgcacctaagcagaaacatgaacatgtacaatttactttttct
gataatacatatcttagatatgatgatgttcgcaaatttggtaggatgcaattgattgaa
acaggtactgagcgaatcaatactggtattaaaaacttaggctttgaaccaaatagtgaa
gattttactctagatttttttctaaacaaggtaaaagctagaaaaagagcgataaaaaat
gtattattagatcaaagtattgtttgtggattagggaatatttatacagatgaagtttta
tggcagagcaaaatacatcccttaagtattgcaaataaaattgctcaagatagtttggta
gaattattttatgatataaacaatacaataaaaatagctattcaataccatggtacgact
tttcatagtttcttagatgctgatggtcatactggtaagtatcaatcaatgctaaaagtt
tatggcaaaagtggtgaaccttgcagccgttgcaatactactttagaaaaaattaaagtt
aatggtcgaggaacaacattctgcccattgtgtcaggtggtttataaatga
DBGET
integrated database retrieval system
