KEGG   Leishmania infantum: LINJ_30_3490
Entry
LINJ_30_3490      CDS       T01112                                 
Name
(RefSeq) putative DNA ligase I
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lif  Leishmania infantum
Pathway
lif03030  DNA replication
lif03410  Base excision repair
lif03420  Nucleotide excision repair
lif03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LINJ_30_3490
   03410 Base excision repair
    LINJ_30_3490
   03420 Nucleotide excision repair
    LINJ_30_3490
   03430 Mismatch repair
    LINJ_30_3490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lif03032]
    LINJ_30_3490
   03400 DNA repair and recombination proteins [BR:lif03400]
    LINJ_30_3490
Enzymes [BR:lif01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LINJ_30_3490
    6.5.1.6  DNA ligase (ATP or NAD+)
     LINJ_30_3490
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     LINJ_30_3490
DNA replication proteins [BR:lif03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LINJ_30_3490
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LINJ_30_3490
DNA repair and recombination proteins [BR:lif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LINJ_30_3490
   NER (nucleotide excision repair)
    Other NER factors
     LINJ_30_3490
   MMR (mismatch excision repair)
    Other MMR factors
     LINJ_30_3490
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 5071249
NCBI-ProteinID: XP_001467203
UniProt: A4I634
LinkDB
Position
30:1267683..1269686
AA seq 667 aa
MAKLFQESSFDPVTTFEAVWLPPRVPVAPPTAGASEPVPFAAVVDVLADISATGSRLECL
KQLTFLLLAVIERCPEDLVPVMYLVINKHAPQHEGVELGIGDAVLVKAVAECCGMTEARA
KEAYRQSGDLAEIAQMHKQKQSTLMKPKPLSARSVFKTYKEIAMMSGRDVMRRRSDLIKG
LLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVGYAFALHFLGGAQMHKMDEVQLQTLL
NTGADSLARIFYEVPSLDVVLSAVLANGFMTLVPGSSIAKRYAKDLSIRPGLPVKPQLAY
PTSSITVILDRLQGKKFTSEYKYDGERAQIHYDKDKGFHIFSRNSETHTGKYPDVISMLP
KVFDPVEVQSFILDSEVVAVHPETGALQAFQVLQHRGRKNIAEEDVSIPVCVFVFDILYF
NGEPQLNKTLQQRRELLWRCIHPLPAKLSFATYLDSDKVEDMQTFLERSIADGCEGLMVK
TLDEEANYTPAKRSHYWLKLKKDYMDGVTDTLDLVPIAAFHGKGKRTGVFGGFLLACYDP
KADEYQSICKIGTGFQDEELEKLTQSLKPFVVDDKPRYYRAGGEEPDVWLTEAQVWEVKA
ADLSVSPVHQAAVGLVDPSKGIALRFPRYLRQREDKKPADATNAQQVADMYKAQSLAVQH
EANGDAE
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggcgaagctcttccaggagtcctccttcgatcctgtgacgacgttcgaggcagtatgg
ttgcctccccgggtccctgtcgcgccgcctaccgctggcgcatctgagccggtgccgttt
gcggcagtagtggacgtgctggcagacatcagcgccaccggctcgcggcttgagtgcttg
aagcagctcacctttcttctgcttgctgttatcgagcggtgcccagaggacttggtgccg
gtgatgtacctggtgattaacaagcatgcgccgcagcacgagggcgtggagctaggcatc
ggcgatgcggtactggtgaaggcggtggccgagtgctgcggcatgacggaggcccgagcc
aaagaggcgtaccggcagagcggcgatttggcggaaatcgcgcagatgcacaagcagaag
caaagcacgctcatgaagccgaagccgctctccgctcggagcgtgttcaagacatacaag
gagatcgcgatgatgagcggcagggatgtgatgcggcggcggtcagacttgatcaaggga
cttttgcgcgacgcacagggcccggaggtgaacttgattgtgcgtgggcttcagcagaag
atgcgcatcggccttgctgagccatccgccttggcagctgtggggtacgccttcgctctt
cacttcctcggaggcgcgcaaatgcacaagatggacgaggtgcagctgcagacgttgctg
aataccggcgccgacagtctcgcgcgtatcttctacgaggtgccgagtctcgacgtggtc
ctgagcgccgttcttgcgaacggcttcatgaccttggtgccgggtagctccatcgcgaaa
cggtatgcgaaggacttgtctattcggcctgggctgccagtgaagccccagctagcgtac
ccgacgagcagtatcaccgtcattctggaccgtctacagggcaagaagttcacgtcggag
tacaagtacgacggcgagcgcgcgcagatccactatgacaaagacaaaggcttccatata
ttttctcgcaactccgagacccacaccggcaaatacccggacgtcatttccatgctgcca
aaggtctttgacccagtcgaagtacagtctttcatcctcgattcggaggttgtggcggtg
catccggagaccggggcccttcaggcattccaagtgctgcagcatcgcggccgaaagaac
attgcagaggaggatgtcagcattcccgtctgcgtgtttgtgtttgatatcttgtatttc
aacggagagccgcaactgaataagacactgcagcagcgtcgcgagctgctgtggcggtgc
atccatccccttccggcaaagctgtcctttgccacttacttggattccgacaaggtcgag
gacatgcaaacgtttttggagaggtccatcgcggacggctgcgaaggattaatggtgaag
acgctcgatgaggaggccaactacacccccgccaagcgctcgcactactggctgaagctg
aagaaggactacatggacggcgtcaccgatacgctggatcttgtccccatcgccgcgttc
cacggcaagggcaagcgaactggcgtgttcggcggcttcctgctggcgtgctacgacccg
aaggcggacgagtaccagagcatctgcaaaatcggcaccggcttccaggacgaagagctg
gagaagctcacgcagtcccttaagccgttcgtggtggacgacaagccgcgctactaccgc
gcaggtggggaggagccggatgtttggctcaccgaggcgcaggtgtgggaggtgaaggcg
gcggacctgtcagtgtcgccagttcatcaggcagccgtggggcttgtggaccccagcaaa
ggcatcgcgctgcgctttcctcgctacctgcgccagcgcgaggacaagaaacccgcagac
gccacaaatgcacagcaggtggcggacatgtacaaggcgcagtccttggcagtgcagcac
gaagcgaacggggacgccgagtga

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