Leptospira interrogans serovar Lai 56601: LA_0984
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Entry
LA_0984 CDS
T00098
Symbol
cdc9
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
lil
Leptospira interrogans serovar Lai 56601
Brite
KEGG Orthology (KO) [BR:
lil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LA_0984 (cdc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lil03400
]
LA_0984 (cdc9)
Enzymes [BR:
lil01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
LA_0984 (cdc9)
DNA repair and recombination proteins [BR:
lil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LA_0984 (cdc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WGR
DNA_ligase_A_M
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
AAN48183
UniProt:
Q8F7G1
LinkDB
All DBs
Position
I:complement(989448..990953)
Genome browser
AA seq
501 aa
AA seq
DB search
MNHQLIFRDDKSDKFWNIETSGNFFTVTYGKTGTAGTSQTKTFETEETCIKEARKLLSEK
LKKGYIEGNDRTEKLTSNNDKKHKSNQQEADKIVISKSEEKTKSAPQKVIEESENEIKQS
SQTSANKKENLKQNSQTQEQNSNPLPSENSTELNKISLYYQGDGSDKVYHVNIDPEGDGY
VVHFAFGRRGSSLQTGTKTSKPVSYEAAQKIMRQLVNSKMAKGYTEIESGAPYLHSTKEE
RVSGVHCQLLNPIDEEELSTYVEDDQYGAQEKLDGNRMMIRKIGDNVEGINRKGLIIAIS
QILHDHSLSFSEDFILDGEVIGDVFFPFDIFSKDGKDIQHLPYQERYAILESILKDQDEI
FHIVKLVKSTKGKKVLLEELREKQKEGIVFKDLNAPYKAGRPSSKGSQIKFKFYETATVS
VETVNLKRSVSMRLYNGNEWVSVGNVTIPVNFAIPKENDIIEVRYLYAYKGGSLYQPTYL
GVRTDADGNDCDLKQLKYKNT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccaacttatattcagagacgataaatcagataaattctggaacatagaaact
tccggaaatttttttacggttacttatggtaaaaccggcacggcggggacttctcaaacc
aaaacttttgaaaccgaagaaacttgtatcaaagaagcacgaaagctactttcggaaaaa
ttaaaaaaaggttatatagaaggaaacgatagaaccgaaaagttgacttctaacaatgat
aaaaaacacaaatccaatcaacaagaagcggataaaattgtaatttctaaatctgaagag
aaaacaaaatctgctccacaaaaagttatcgaagaatcagaaaacgaaatcaaacaatcg
tcccaaacatccgcaaataaaaaagaaaacttaaaacaaaactcgcaaactcaagaacaa
aattcaaatccccttccttcagaaaattctacagaattaaataaaattagtctctattat
caaggagacggcagcgataaagtttatcatgtaaatatagatccggaaggagacggttac
gtggttcattttgcattcggaagaagaggaagctctcttcaaaccggaaccaaaacctca
aaaccagtatcttacgaagccgcacaaaaaattatgcgccaacttgtaaattccaagatg
gcgaaaggatacacagaaatagaatccggcgctccttatttacattctacaaaagaagaa
cgagtaagcggtgttcattgtcaactactcaaccctatcgacgaagaagaactttccacg
tatgtagaagacgaccaatacggagcccaagaaaaattagacggcaatcgtatgatgatt
cgtaaaattggagacaacgtagaaggaatcaatcgtaaaggtttgatcatcgcaatttcg
caaattttacatgaccactctctgagtttttcagaagattttattttagacggagaagta
atcggagacgttttttttcctttcgacattttttcaaaagacggtaaagacattcaacac
cttccctatcaagaacgttatgcgatactggaatctattttaaaagatcaagatgagatc
tttcatatcgtaaaactagtcaagtctacaaaaggtaaaaaagttctgctcgaagaatta
cgcgaaaaacaaaaagaaggaatcgtattcaaagatttgaatgctccttataaagcggga
cgtccttcaagcaaaggttctcagattaaatttaaattttacgaaaccgcaaccgtaagc
gtagaaacggtaaatctaaaacgtagcgttagtatgcgtctctacaacggaaacgaatgg
gtttccgtcggcaacgtcaccattccggttaattttgcaatcccaaaggaaaacgacatc
atagaagtacgttatttatacgcctacaaaggaggctccttgtatcaacctacttatctt
ggagtccgcaccgatgcggacggaaacgactgtgatttaaaacagcttaagtataaaaat
acttaa
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