Limnohabitans sp. 103DPR2: L103DPR2_01821
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Entry
L103DPR2_01821 CDS
T04120
Symbol
metC
Name
(GenBank) Cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00270
Cysteine and methionine metabolism
lim00450
Selenocompound metabolism
lim01100
Metabolic pathways
lim01110
Biosynthesis of secondary metabolites
lim01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
L103DPR2_01821 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
L103DPR2_01821 (metC)
Enzymes [BR:
lim01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
L103DPR2_01821 (metC)
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Motif
Pfam:
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ALK92219
UniProt:
A0A0P0MGS3
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Position
complement(1876034..1877260)
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AA seq
408 aa
AA seq
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MSEKNTSHTSTQLIHHGYTPPAEFQAPQPGIFKASTVFFPNVAAMRQREWKDKSAYTYGT
HGTPSSFTLEERLCTLEGGKHCVLTPSGLSALAVAAFAVLKTGDHVLLPDNSYGPNKTLA
EGELQSFGITHTYYDAMNPKDLADKIQANTKLVWLEAPGSVSMEFPDLIALVQTCKTHSV
ITALDNTWGAGLAFKPFDLLGDGSLSVDMTAHALTKYPSGGGDVLMGSVMTCDDGLAMKL
KLTMMRLGICVGPNDVESILRSLPTITLRYEAQDQTARKLATWWQSQTACVQVMHPAIEG
SPGHAHWKALCAPHGGAGHAAGLFSVMLSPKLTQTQVDAFCDTLKLFKIGYSWGGPVSLV
VPYNIASMRSDWPAQLQPGFLVRFSTGFESADDLMADLSQAATHCLNI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaaacacatcccacacgtcaacccaactgatacaccacggctacacgcca
ccggctgagttccaagcacctcagccgggtattttcaaagcctcaacggttttctttccc
aatgtggccgccatgcgccagcgggaatggaaagacaaatccgcctacacctacggcacc
cacggcactccctcatccttcaccttagaagaacgcctttgcaccttagaaggtggcaaa
cattgcgtgctcacgcccagtggtttatccgcattggcggtggcagcatttgcagttctg
aaaactggcgaccatgtgctcttgccagacaattcatatggccccaacaaaacattggcg
gaaggtgaattgcagtcctttggcatcacgcacacgtactacgatgccatgaaccccaaa
gacctggctgacaaaattcaagccaacaccaagctggtttggctggaggcgccaggctct
gtcagcatggagtttcctgacctcattgcgttggttcaaacatgcaaaacgcactcggtg
atcacggccttggacaacacttggggcgcaggcttggctttcaagccctttgatttgtta
ggcgacggcagcctgtctgttgacatgacagcccatgcgttgaccaagtaccccagtggg
ggtggcgatgtcctgatgggcagcgtcatgacctgtgacgatggtttggccatgaagctc
aaactgaccatgatgcgattgggcatttgtgtagggcccaacgatgtcgagtcaattttg
cgttcactgcccaccatcaccttgcgctacgaggctcaagatcaaacggctcgaaaattg
gccacttggtggcaatcacaaacggcgtgtgtgcaagtgatgcatcctgccattgaaggc
tcgcctggccacgctcactggaaagctttgtgtgcccctcatgggggggccggtcatgcg
gcgggtctgttcagtgtcatgctaagccccaaactgacgcaaactcaagtggatgcgttt
tgcgacactttgaagctcttcaaaattggctacagttggggcggccctgtgagtttggtg
gtgccttacaacatcgccagcatgcgctccgattggcctgcacagttgcagccaggcttc
ttggttcgattctctacgggatttgaatctgccgatgatttgatggctgatttgtcacaa
gccgcaacgcactgcttgaatatttga
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