Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_13675
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Entry
JL53_13675 CDS
T03402
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lio
Listeria ivanovii subsp. londoniensis WSLC 30151
Pathway
lio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL53_13675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lio03021
]
JL53_13675
03019 Messenger RNA biogenesis [BR:
lio03019
]
JL53_13675
Transcription machinery [BR:
lio03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JL53_13675
Messenger RNA biogenesis [BR:
lio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JL53_13675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
OB_RNB
NACHT
AAA_22
AAA_25
AAA
Spore_III_AA
Mor
Motif
Other DBs
NCBI-ProteinID:
AIS63697
UniProt:
A0A097BGA9
LinkDB
All DBs
Position
complement(2779504..2780775)
Genome browser
AA seq
423 aa
AA seq
DB search
MAKLSIAYLESLTIKDIYALAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEI
IPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDKVSGKVRPPKENERYFGLLHVEA
VNGENPEVAKERVHFPGLTPLYPDRQIHLETEKTPISTRTIDLISPIGFGQRGLIVAPPK
AGKTVLLKEIANAITTNHPDSELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIK
VAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMR
RSGTRKEELLLSKERLEQLWKIRKAMPKQSDGLDISERFVRYLKKTANNEAFYELLQEEM
FKK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctaaactgtccattgcatacttagaaagtttaacaattaaagatatttatgcccta
gcaaaagaacataaaattgcctattatagcaaactaaccaaaagagagctgatttttgcg
ctattaaaatcaaatgcagaaaaagagggattcttctttatggaaggtgttttagaaatc
atcccgaatgaagggtttggtttcttacgaccgattaattattcatccagttcggaagat
atttatatttcggcttcacaaatcaggcgttttgaacttagaacaggggataaagtctct
ggtaaagtccgcccaccaaaagaaaatgaacgttattttggattattgcatgtcgaagca
gtcaatggagagaatccagaagttgcgaaagaaagagtgcattttccaggattgactcca
ctttacccagatcgtcaaattcatttagaaacagaaaaaacgccgatttctacaagaaca
atcgatttaatctctccaataggttttggacagcggggattaattgttgctcctccaaaa
gctggtaaaaccgttctattaaaagaaattgccaatgcgattacaactaatcacccggat
tcagaattgattgtcttgctaatagatgagcgccctgaagaagtaacggatatcgaacgt
tcggtaaaagcagatgttgtaagctctacgtttgatgaggtgccagagaaccacattaaa
gtagccgaattagtcttagaacgtgcgatgcgccttgtggaacaaaaacgagatgtagtt
attttgatggatagtattactagattagcaagagcttataatttagttattcctcctagt
ggtcgaacgctttcgggggggattgacccagcagctttccataggccaaaacgttttttc
ggtgcagcacgtaatattgaagaaggtggtagtctaacaatccttgcaacagcacttgtg
gatacaggttcgcggatggacgatgtcatttatgaggaatttaaaggaactggtaacatg
gaattacatttggatcgtcaattggctgaacgtcgtgtctttcctgctattgatatgcgt
cgttcaggaacaagaaaagaagaactactattatctaaagagcgcttagagcaactttgg
aaaattagaaaagcgatgccaaaacaaagtgacggacttgatatttctgagcgtttcgtc
cgctatttgaaaaaaacagcaaataatgaggcgttttatgaattattacaagaagagatg
tttaaaaaataa
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