Lawsonia intracellularis PHE/MN1-00: LI0785
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Entry
LI0785 CDS
T00354
Symbol
gyrB
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lip03032
]
LI0785 (gyrB)
03400 DNA repair and recombination proteins [BR:
lip03400
]
LI0785 (gyrB)
Enzymes [BR:
lip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LI0785 (gyrB)
DNA replication proteins [BR:
lip03032
]
Prokaryotic type
DNA Topoisomerases
LI0785 (gyrB)
DNA repair and recombination proteins [BR:
lip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LI0785 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
ATP-synt_DE
Motif
Other DBs
NCBI-ProteinID:
CAJ54839
UniProt:
Q1MQ88
LinkDB
All DBs
Position
complement(975610..978009)
Genome browser
AA seq
799 aa
AA seq
DB search
MASNSEIIPKDYTADSITILEGLQAVRMRPAMYIGSTDTRGLHHLVYEVIDNSIDEAMAG
FCTRIDVVLHLDNSITVRDNGRGIPVDIHPKEGVPAVQVVMTKLHAGGKFDNDTYKVSGG
LHGVGLSCVNALSEQLEVTILRGGYRWKQKYSRGVPLENLQRIGESDNHGTTIRFKADEE
IFETTEYSYETLKRRFEELAYLNKGLEIHCTDERTSETHLFKAEGGIHQFVKDINTGESI
LHSIISRESIVEGVMIDFALQYNAGYKENTLTFANNIRTKEGGTHLAGFKTALTRAINGY
IKGQPDLSKKLKGQTLSGDDVREGLTAVLSVKLPNPQFEGQTKTKLGNSEIAGIVGGAVY
TSLDTYFQENPKDIRCIIDKAIDAARAREAARRAKELVRRKGALFDNALPGKLADCQSKN
PAESELFIVEGDSAGGSAKQGRNPNIQAILPLRGKILNIERTRFDKMLANKEIKALITAM
GAGIGEEDTDYQKLRYYKIVIMTDADVDGAHIRTLLLTFFFRNYVGLIERGHLYIAQPPL
YRVHNSKSEKFIKDDPSLNDFLLHRVSSELEIQTESGKLLKGSDIITTMKQIESISQRTK
DAELAGISENLFMLLITSPKKLTSDVLSSLEEIQLYLNTSGYNITVENESHEDGDRLFTI
FENKNGHKTRIPADFFASKIYSSTWDVMDSLLTMCGGINFIVFHSGTSHTINDLFKLYQF
TLDEARKGINIQRYKGLGEMNPEQLWVTTMDPQNRTLLQVTINDAEEANETFEQLMGERV
EPRREFIERNALNVRDLDI
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaatagcgaaataataccaaaagattatacagcagattctattactattctt
gaaggccttcaagctgtacgtatgcgtccagctatgtatattggaagtactgatacacgt
ggacttcatcaccttgtttatgaagttatagataactcaatagatgaggctatggctggt
ttttgtactcggattgatgttgttcttcatcttgataatagtataactgttagagacaat
ggtcgtggtatccctgtagatatacatcctaaagaaggtgttcctgctgtccaagttgtt
atgacaaaactccatgctggaggaaaatttgataatgacacttataaagtttctggtgga
ttacatggtgttggcctttcttgtgtaaatgctctttctgaacaacttgaagtaacaatt
ttacgtggtggttatcgttggaaacaaaaatatagtcgaggtgttccactagaaaactta
caacgtataggtgaatctgataatcatggaacaacaatacgttttaaagcagatgaagaa
atttttgaaacaacagaatattcatatgaaacattaaaaagacgatttgaagaacttgct
tatttaaataaagggcttgaaattcattgtacagatgaaagaacaagtgaaacacacctt
tttaaagctgagggtggaattcatcagtttgtaaaagatataaatacaggtgaaagcata
ttacattcaattatttcaagagaatccattgttgaaggtgtaatgattgattttgcacta
caatataatgctggttataaagaaaatacacttacgtttgcaaataacattcgaacaaag
gaaggtggaacccatcttgctggatttaaaacagcattaactagagctataaatggatat
ataaaaggtcagccagatttatctaagaagttgaaaggacaaactctttctggagatgac
gttcgtgaaggtttaacagcagttttaagtgtaaaattaccaaacccacagtttgaagga
caaacaaaaacaaaactagggaatagcgaaatagcaggaatagttggtggagctgtatat
acaagtttagacacatattttcaagaaaacccaaaagatattcgatgtataatagataaa
gctattgatgcagctagagcacgtgaagctgctcgacgagcaaaagaacttgttagaaga
aagggagcgttgtttgataatgcactccctggtaaacttgctgattgtcaaagtaaaaac
cctgctgaatctgaactttttattgttgagggagattctgcaggtggttctgctaagcaa
ggaagaaatcctaatattcaagcaatattacctcttagaggaaaaattttaaatatagaa
cgtacacgttttgataagatgctagcaaataaagagattaaagcattaattacagctatg
ggagctggcattggagaagaagatactgactatcaaaagcttcgttattataaaattgtt
atcatgacagatgcagatgttgatggggctcatattcgaacattattacttacattcttt
tttcgtaactatgttggacttattgaacgtgggcatttatacatagcacaacccccacta
taccgtgttcataacagtaaatcagaaaaatttataaaagatgatccttctcttaatgat
tttctccttcatcgtgtaagtagtgaactagaaattcaaacagagagtggaaaactttta
aaaggttctgatattattacaactatgaagcagatagaatctatatcacaacgaactaaa
gatgctgaattagcaggaatttctgaaaatctttttatgttattaattactagtcctaaa
aaacttacttctgacgttttatcttcattagaagaaattcaattatatttaaatacatca
ggttacaacattactgtagaaaatgaaagtcatgaggatggagatagattatttactatt
tttgaaaataaaaatggacataaaacacgtatacctgcagatttttttgcttctaaaatt
tattccagtacttgggacgtgatggattcacttctaacaatgtgtggtggaataaatttt
attgtttttcatagtggaacatctcatacaattaatgatctttttaaactttatcaattt
acacttgatgaggcacgtaaagggataaatatacagcggtataaaggtcttggagagatg
aaccctgaacagctttgggtgacaacaatggatcctcaaaatcgtacacttcttcaagta
acaataaatgatgcagaagaggcaaatgagacatttgaacaacttatgggtgaacgtgta
gagcctcgccgtgaatttattgaacgtaatgcattaaatgtaagagacctagatatttaa
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