Lactobacillus intestinalis: KBW87_02785
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Entry
KBW87_02785 CDS
T08339
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KBW87_02785 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_02785 (mutM)
Enzymes [BR:
liq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KBW87_02785 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KBW87_02785 (mutM)
DNA repair and recombination proteins [BR:
liq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KBW87_02785 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
zinc-ribbons_6
OrfB_Zn_ribbon
zf-TFIIB
ZNF512_C2H2
Motif
Other DBs
NCBI-ProteinID:
UTW40817
LinkDB
All DBs
Position
606700..607530
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AA seq
276 aa
AA seq
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MPEMPEVETVRRSLIPLIKGKTIKNVTLWYPNIVASDQSEFVHDLVNKKVIGIDRYAKYL
LIRLSDNLTIVSHLRMEGKYHLVDVDTPKDKHDHVQFEFTDHTALRYNDVRKFGRMQLIL
TGSEKTATAIGRLGVEPNSADFTDQYFISKLKTKKKNIKNTLLDQTIVAGLGNIYVDEVL
WQAKIHPLSVSRAIPADKVKELRKNINHTIKWATELHGTTVHTYLDANGNYGGFQDKLKV
YGHSGEECPRCNTILEKIKVNGRGTTFCPHCQVIYK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaatgccagaagtggaaacagtgagaagatcgctgattcctttaattaaaggg
aaaactataaaaaatgtaacattgtggtatcccaatattgtagccagtgatcaaagtgaa
tttgttcatgatttagtaaataaaaaggtgattggcatcgatcgttatgccaagtatctc
ttgattagattaagtgataatctaactattgtgtctcatttgcggatggaaggtaagtat
cacttagttgatgtggatacgcctaaagataagcatgatcatgttcaatttgaattcact
gatcatactgcacttagatataatgatgttcgtaaattcggccgaatgcagcttatttta
accggaagtgaaaagacagcaactgcaattggaagattgggcgtagagccaaattcagct
gattttactgatcaatattttatttctaaactcaaaacaaagaaaaagaatattaaaaat
actctgctagatcaaacgattgtagcaggacttggaaatatatatgtggatgaggtttta
tggcaagcaaagattcatccgcttagtgtttcaagggctattcctgcagacaaagtaaaa
gaactacgtaaaaatattaatcatacgattaaatgggcaactgaattgcatggaaccaca
gtccatacttatcttgatgctaatggaaactatggcggttttcaagataagcttaaagta
tatggtcatagtggcgaagaatgtcctagatgtaatacaatattagaaaaaatcaaagta
aatgggcgaggaacaacattttgcccgcattgtcaggtgatatataaatga
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