KEGG   Lactobacillus intestinalis: KBW87_09470
Entry
KBW87_09470       CDS       T08339                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
liq  Lactobacillus intestinalis
Brite
KEGG Orthology (KO) [BR:liq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:liq02048]
    KBW87_09470 (hsdR)
Enzymes [BR:liq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     KBW87_09470 (hsdR)
Prokaryotic defense system [BR:liq02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   KBW87_09470 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C SLFN-g3_helicase AAA_19 HSDR_N DUF4145 SNF2-rel_dom T2SSE PhoH UvrD-helicase
Other DBs
NCBI-ProteinID: UTW41322
LinkDB
Position
unnamed2:complement(293949..297164)
AA seq 1071 aa
MSNFQTSEKNYQEYAKLASSAESLIYSDPRSSLTVFGTFGEQLTKEIMHLDGIVDWELNQ
QQRIEKLARSQNEYPIVVLNALNIIRLKRNKAAHDDHFIATKADALKIDEQAYLIWKWFL
DVYSLDQVADYVKPIDQQTLLKDQENKIKLLEEKIKQLQTNRPPVTVTPAEQTRRHKVNV
EFAKKHQLTEAETRQLIDHQLQQAGWEADSEELNNWTKQTEPQKGHNMAIAEWVLPNGQR
ADYALFKGLEFYGIVEAKKWDQDIAGQMVQPKEYAKEVPFRSDYHLVTNEMSDYKVPFIY
TANGRPYLKQYQEKSGIWFWDARNPKENAYALEEFHHPEDLTLKLTARNKDTADDDLVND
QDYPKFADRPYQIAAINAIEDAIKNKKKRILLAMATGTGKTRTAISLMYRLLKHKRARRI
LYLVDRNSLGRQTANAIKDNKIGSMSISSIYGLKELSDKVPDASTKIQIATVQGMIKRLF
FSNNDSEKPSVGQYDFIIVDEAHRGYAEDRELSDSEYQFYNQDEYVSQYRRVVDYFDATA
IGMTATPALQTTEIFGTPVYTYSYQQAVLDGYLVDHDAPVIIETKLAKEGIHFKKGAEVD
VFNQDEKTIDKEKLPDNMNFDVKDFNHRVITKSFNKVVCDTLVERYLDPNDENVGKTLIF
AATDEHADMVVDLLKQAFKDAGRPVDDDTIEKITGSIRHPNQEIKNFKNEANPNIVVTVD
LLTTGVDVPKITNIVFLRRVQSRILYEQMLGRATRLCPEIHKDKFTIYDAVGIYDAMNKV
TNMKPVVKNPSHNIHYFLNHKKDYFEVNEDSYQYQVDMAGAVERKIKRLDDKKRKEFERL
AEVKSVDSWAGKLSKLDKESFLKEWPKFKRLDRLNLTQRKQVISNAEDKVVNIVRGYGNG
NQEPADYIDSFTEFIKKNVDTIPALQVIATRPKDLTYSELKDIKLKLEQNGFKENDLQTA
WKSAKHVQTTADIISFIRQVASGSELIDHDVRIHNAMQKVYGMADWTIPQKKWLKKIENQ
LMASTVLGPTAEHAFDDNFYFKRQGGYRQMKKIFPENADQIIYVLNENLYV
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgtctaattttcaaacttcagaaaagaactaccaagaatatgctaaattggcttcaagt
gcagaatcactcatttattcggatccgagaagcagtttgacggtttttggaacttttggt
gaacaacttactaaagaaataatgcatttagatgggatagtagattgggaacttaatcaa
caacagcggattgaaaaattagctcgttcacaaaatgaatatccaattgttgttttgaat
gcattgaatatcattcgactcaagcgtaataaggccgctcatgatgatcactttattgcg
acgaaagctgatgctttgaaaattgatgaacaggcatatttaatatggaagtggttctta
gatgtctattctttggatcaggtagctgactatgttaaacctatagatcaacaaactctt
ttaaaagatcaagaaaataaaatcaagcttctcgaagaaaaaatcaaacagctgcaaacc
aatcgtcctccagtcactgtgacgccagccgagcaaacacggagacataaagttaatgtg
gagtttgctaaaaaacatcaactaactgaagctgaaactaggcaattaattgatcatcaa
cttcaacaggcaggttgggaagctgatagtgaagaattgaataattggactaagcaaact
gaaccgcaaaagggccataatatggcgattgctgaatgggttctccctaatggccaaagg
gcagactatgctctgtttaagggactagaattttatggaattgttgaagctaaaaaatgg
gatcaagatattgcaggtcaaatggttcaacctaaggaatatgctaaagaggttcccttt
agatcagactatcatttagttacaaatgaaatgagcgattataaagttcccttcatctat
actgctaatggacgtccttatttaaagcaatatcaagaaaagtctggaatttggttctgg
gatgcacgcaatcctaaggaaaatgcgtatgcactagaagaatttcaccatcccgaagac
ttaacactaaaactaaccgcaagaaataaagatacagctgatgacgatttggtgaatgat
caggactatcctaaatttgcagatcggccttatcaaattgccgctatcaatgcaatcgaa
gatgcaattaaaaataaaaagaagcgtattttacttgcaatggcgacaggaactggaaaa
actagaactgcaatttcattaatgtatcgtttacttaagcacaagcgtgccagaagaatt
ctttatttagtagatagaaattcccttggtcgtcaaacagcaaatgctattaaagataat
aaaattggtagcatgtcgatttcatcaatttatgggttaaaggaactcagcgataaagta
ccagatgcttccactaagattcaaattgctacggttcaagggatgattaagcggctcttc
tttagcaataacgattctgaaaagccttccgttggtcaatatgactttattattgttgat
gaagctcaccgtggttatgccgaggatcgggaattaagtgatagtgaatatcaattttat
aatcaagatgaatatgtgagtcaatatcggcgtgtggtggattattttgacgctacagct
atcggaatgactgccactccggctttgcagactactgaaatttttggcactcctgtctat
acctatagttatcagcaagctgtccttgatggctacttagtggaccatgatgcgccagta
attattgaaactaaacttgcaaaagaaggaattcacttcaaaaagggcgctgaggtcgat
gtgttcaatcaagatgaaaaaactatcgataaagaaaagctacctgataatatgaacttt
gatgttaaggacttcaatcatcgagtaattactaaaagcttcaataaggtcgtatgtgat
actttagttgaaagatatcttgatccaaatgatgaaaatgtcggaaagacgttgattttt
gcggcaactgatgaacatgctgatatggtagtcgatcttttgaagcaagcctttaaggat
gctggtagaccagtagatgatgatacaatcgaaaagatcaccggttcaatccgtcatcct
aaccaagaaatcaagaattttaaaaatgaagctaatcctaatattgtagtaactgttgac
ttattgacaactggggtggatgtgcctaagattactaatattgtctttttaagacgagtt
caatcaagaatcttgtacgagcaaatgctgggtcgtgcaacgcgtctttgtcccgaaatt
cataaggacaagtttactatctatgatgcagtcggaatttacgatgcaatgaataaagtt
accaatatgaagcccgtggttaaaaatccaagtcacaacattcattacttcttgaatcat
aagaaggattattttgaagttaatgaggattcataccaatatcaagtggatatggctggt
gcagttgaaagaaaaatcaaacgcttagatgataagaagagaaaagagtttgaacgttta
gccgaggtgaagtcagttgatagttgggctggaaaattaagcaagcttgataaagagagt
ttcttgaaagagtggccaaagtttaaacgactagatcggcttaatcttactcaacgaaag
caagtgatttcgaatgctgaggataaggtcgtcaatattgttcgtgggtatgggaatggt
aatcaagaaccagctgattatattgatagttttacggagtttatcaaaaagaatgtggat
acgattccggctttgcaggtaattgctactcgaccgaaagatttgacgtatagcgaattg
aaagatattaagttaaagcttgagcagaatggctttaaagaaaatgaccttcaaacggct
tggaagagtgctaagcatgttcaaactacggccgatatcattagctttattcggcaagta
gcatctggatcagaattgatagaccatgatgtgcgcattcataatgccatgcaaaaggtc
tacggcatggctgattggacgattccacaaaagaagtggttgaaaaagatcgaaaatcaa
ttaatggcatcgaccgtccttggtccaactgctgagcacgcttttgatgataacttttat
ttcaagcgtcaaggtggttatcgccaaatgaagaagatctttccagagaatgcggatcag
ataatttatgtattaaatgagaatttatatgtttaa

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