Lichenihabitans sp. PAMC28606: LGH83_06315
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Entry
LGH83_06315 CDS
T07621
Name
(GenBank) site-specific integrase
Organism
liz
Lichenihabitans sp. PAMC28606
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Gene cluster
GFIT
Motif
Pfam:
Arm-DNA-bind_3
Phage_integrase
Phage_int_SAM_3
CtnDOT_TraJ
Motif
Other DBs
NCBI-ProteinID:
UDL95813
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Position
1306809..1308092
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AA seq
427 aa
AA seq
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MPKLTKRMIDALSVQPGQDALLWDDELRGFGLRIKASGAKSFLVQYRNANGRSRRITVGR
YGVLTPEEGRSQARKVLAEVARGNDPAESRRTERQATTVAELCHAYIEKADQGLIITRRR
QAKKASTIVTDRGRIERHIIPLLGHRPIKDVSSADIRAFLRDVSSGKTAADVKTKARGRA
IVTGGRGTATRTLGLLGGIFTHAVEEGHRADNPVTGVVRPADKKRSMRLDEEGYRRLGRR
LAAAERMGKRWQVVEAIRLLALTGCRRGEVEGLRRVEVDLAGRALRLGDSKTGRSIRPLG
QAAAELLERTMARTKGEFVFPSIRGQGSFQGLPKAWGTIVGRRMPGVTPHVLRHSFASTA
EDLGFTVPTIAALLGHSGGGVTAGYIHKLDGALVAAADRVSLVIASQTAARRQKIVQLKQ
PAKPKSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagctcacgaaacggatgatcgacgcgctgtccgtccaacctggacaggatgcg
ctcctctgggacgacgagctgcgtggcttcgggctgcgaataaaggcgagcggcgccaag
tcgttcctggtgcaatacaggaacgcgaacggtcgcagtcggcgcattacggtcggccgc
tacggcgtgctgacgccagaggagggtcgaagccaggctcgcaaggtgcttgccgaagtc
gcccgaggcaacgatccggccgagagccggcgaacagaacggcaggcgaccacggtagcc
gagctctgccacgcgtacatcgagaaggccgaccaaggcttgatcattacgcggcggcgg
caggccaagaaggcctcgaccatcgtgacggatcgcggccggatcgagcgccacatcatt
ccgctcctggggcatcggcccatcaaagatgtgtcgtcggcggatattcgtgcgttcctg
cgcgacgtgtcatccggcaagacggccgctgacgtgaagacaaaggcccgaggtcgcgcc
atcgtcactggtggtcgaggaacggccacacgcacgctcggccttttgggcggcatcttc
acgcatgcggtggaagaggggcatcgtgccgacaacccggttacgggcgttgtccggccg
gctgacaagaaacggtccatgcggctggacgaagagggttatcggcgtcttggtcggcgg
ttggccgcagccgagcggatggggaaaagatggcaggtggtcgaggccatccgcctcctg
gcgctaacgggatgccggcggggtgaggtcgagggattgcgcagggtcgaggttgatctc
gctggccgggcgctccgcctcggtgacagcaagacgggccgcagcattcgccccctaggc
caggcagccgctgagttgcttgagcgcacgatggcgcggaccaagggcgagttcgtgttt
ccgtccatacgagggcaaggcagttttcagggactgccgaaggcgtggggcacgatcgtc
ggtcgccgtatgccgggggtgactccgcatgtgctccgacattcgttcgcgtcgacggca
gaagatctgggcttcacggtgccaaccatcgccgcgttgctggggcattcaggaggaggg
gtgacggccggctacattcacaagcttgatggcgcactggtggcagccgcagacagagta
tccctagtcatcgccagccagaccgcagcaaggcgtcagaagattgtgcaactaaaacaa
ccagcgaagcccaagagccgatag
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