Lotus japonicus: Lj1g3v1911730.1
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Entry
Lj1g3v1911730.1 CDS
T04348
Symbol
Lj1g3v1911730.1
Name
(Kazusa) -
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lja03036
]
Lj1g3v1911730.1 (Lj1g3v1911730.1)
Enzymes [BR:
lja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
Lj1g3v1911730.1 (Lj1g3v1911730.1)
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
Lj1g3v1911730.1 (Lj1g3v1911730.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
Motif
LinkDB
All DBs
AA seq
1201 aa
AA seq
DB search
MDLGGSEKESVVTQVSIGGFDSEVKAHDLAEFLENRIGLVYRCRLKTSWTPPESYPEFNV
ADTALVKRTDDYKKVEPHAFVHFALPESATEALDASGSCDLMWEGKPLKVISGPQNPYFL
NQRRRKETPFKLSDVLVEIGTLVSPEEFVVAWRGPEKGVNLLVDPFDRMCRLRFSRDTAF
SIKQNEKKAVIKCDFKVEFMVRDIYEVRRYDDTSYRVVLLHLASSPLVWYRTADDDIEES
VSFDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRHGAKLMKAMAYLNFQRVQEFPLK
RPLRIQDEPNFGVPMSDDFFYIHCQEGITFDIMFLVNAVIHKGILNPYSLSDRFFEVLRN
QPQEVNVAALKHLCSYKRPVFDAAKRLKTVQEWLLRNPKLYQSSKQADDIVEVRRLVITP
TRAYCVPPEHELSNRVLRRYREVSNRFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNS
FPQKTRIYKRVKTILEEGFHFCDRKYAFLAFSSNQLRDRSAWFFAEDDKIKCDGIRDWMG
RFSNRNVAKCAARMGQCFSSTYATVEVPATEVNSMLPDIERNTYVFSDGIGIITPDLAGE
VAEKLKLDIAPSAYQIRYAGFKGVVASWPAKGDGIRLSLRTSMNKFQSSHTTLEICAWTR
FQPGFLNRQIITLLSALEVSDEVFWKMQEVMISKLNQMLVNADVAFDVLTKSCAEHGNAA
AIMLSCGFSPQTEPHLKGMLTSIRAAQLWGLREKSRIFVSSGRWLMGVLDELGVLEQGQC
FVQVSTPSLENCFSKHGSRFSETKSLQVVKGYVVIAKNPCLHPGDVRILEAIDSPDLHHL
YDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKRSWIPMEYDAQESKLQTRK
VTSRDIIDFFVRNMVNENLGAICNAHVVHADSSDHGALDEKCIILAEKAAAAVDFPKTGK
LVIMPSELKPKLYPDFMGKDQHMSYKSKKILGRLYRRIKDAYDKDIDAPELNYVTGAIPY
DTELEVPGSADFIADAWKQKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGE
LKERLKHSYSALKKEFRQTFEKLDSDFRELGEEEKNLLYEKKASAWYQVTYHPTWVKKSL
ELQDKSPENLESNSLGETVMLSFPWIAVDYLARTKIRNRGFGRFDSTKPVGSLAKYLSER
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggatctaggagggagtgagaaggaatcagtggttacacaagtgagcattggaggtttt
gatagtgaagtgaaagcacatgatcttgctgagtttctggaaaatagaattggacttgtt
tacagatgcaggctgaaaacatcttggacaccgccggagtcctatccggaatttaatgtc
gcggatactgcattggttaagaggacagatgactacaagaaggtggagcctcatgccttt
gtgcattttgcgttgccggaatctgcgactgaggcgcttgatgcttcgggtagttgtgat
ctaatgtgggagggcaaaccgttgaaggttatcagcgggcctcagaatccgtactttttg
aaccagaggaggagaaaggagaccccttttaagctgtctgatgtgcttgttgaaattggg
actttggttagtccggaagagtttgttgttgcttggagagggcctgaaaaaggggtgaac
ttgcttgtggatccttttgataggatgtgcaggcttcgtttcagtagggatactgcattc
tcgatcaaacaaaatgaaaaaaaagcagtgataaagtgtgattttaaggtggagttcatg
gttagagacatatatgaggtcaggagatatgatgatacatcgtatcgtgttgttttattg
catctagcttcctcgcctttggtttggtatagaactgctgatgatgacattgaggaatcg
gtctcatttgatttgctggatgatgatgatccttggattaggaccactgattttactcct
agtggtgccattggtcgatgcaatttttacagaatctcaatcccacctcgccatggtgct
aaattgatgaaggccatggcttatctgaactttcaaagagtgcaggagtttccacttaaa
cgtccacttaggatacaggatgaacctaattttggggtgcccatgtcagatgatttcttc
tatatacattgtcaggaggggattacttttgacataatgttcttggttaatgcagtcata
cacaaaggcatactaaatccttacagtttatcagataggttttttgaagtactgagaaat
caacctcaggaggtcaatgtggctgctttgaagcacttatgttcttacaagcgtccagtg
tttgatgcagctaagaggctgaagacagtccaagaatggctgctcagaaatccgaagctt
tatcagagctccaaacaggcagatgatattgttgaggttagaagactggttattactcca
acgagagcctattgtgtaccaccagaacatgaattgtccaacagggttcttagaagatac
agagaagtttcaaatcgtttcttgagggtcacctttatggatgaaggcatgcagacaatt
aatgtgaatgctcttaactattatgttgctcccatagttaaggaaatcacatcaaactcc
tttcctcagaagacaagaatatataaaagggtgaagactatcctagaagagggatttcac
ttttgtgaccgtaaatacgcatttttagccttttcatccaatcaactcagagatcgttct
gcttggttttttgctgaagacgacaaaataaaatgtgacggtataagagattggatgggt
aggttcagtaacaggaatgttgcaaaatgtgctgctaggatgggacaatgcttctcatct
acttatgcaacagtggaagttcctgcaactgaagttaactccatgctgcctgatattgag
aggaatacatatgttttctctgatggtattggtattatcactcccgaccttgcaggtgaa
gttgcagaaaaattaaaactggacattgcaccctctgcttaccagattagatatgctggt
tttaaaggggtagtagcctcttggcctgctaaaggggatgggatcagactttctttgagg
actagcatgaacaagtttcaatctagtcatactactttggagatttgtgcttggacacgg
tttcagcctggttttcttaataggcagattataacattgctttcagcactggaggtatct
gatgaagtattctggaaaatgcaagaggtaatgatttcaaagctgaatcaaatgcttgtc
aatgcagatgtggcatttgatgttcttactaagtcttgtgctgagcatggaaatgctgca
gcaataatgttaagttgtggcttcagtccccaaactgaacctcatcttaaaggtatgtta
acttctatacgtgctgcacagctttggggccttagagagaagtccaggatttttgtttca
tctgggcgatggttgatgggtgtcttagatgagttgggtgtgcttgaacaagggcagtgc
tttgttcaagtgtctactccttctctggaaaattgtttctctaagcatggctctaggttt
tcagagacaaagagcctgcaggtagttaaaggttatgttgttatagccaaaaatccatgt
cttcaccctggagatgtaagaattttggaggccattgattcccctgatctacatcattta
tatgattgtcttgttttccctcaaaagggtgacagaccccatacaaatgaagcttctgga
agtgaccttgacggggatctatattttgtcacatgggatgataatcttattccacctagt
aagaggagctggatccctatggagtacgatgctcaagaaagcaaacttcaaactcggaaa
gtcacttcccgggacatcatagatttttttgtcagaaacatggtgaatgagaatttgggt
gcaatctgcaatgcacatgtggtacatgctgattccagtgatcatggcgccttggatgag
aaatgcataatcttggctgaaaaggcagccgctgctgttgattttccaaagactgggaag
cttgtcattatgccttcggagttgaaaccaaagctctaccctgatttcatggggaaagat
caacacatgtcttacaagtccaagaaaatcctgggtagactttacaggaggattaaagat
gcttatgacaaagatatcgatgcacctgaattgaactatgtgacaggtgctataccttat
gatacagaacttgaggttcctggatctgctgattttattgctgatgcatggaaacaaaag
tgctcctatgatggccagttgagcgggctattgggtcagtacaaggtgaaaagagaagaa
gaagttgtcaccggtcagatttggtccatgcccaaatacaacagcagaaaacaaggggag
cttaaggagaggctgaagcactcatatagtgccctgaaaaaagaatttaggcaaactttt
gagaagttggattcagattttcgagaattaggcgaggaagaaaaaaatttgttgtatgag
aagaaagcttcagcctggtatcaggtgacatatcatcctacatgggtgaaaaaatccctt
gagctgcaagataaatccccagagaacctagagtcaaatagtttgggggagacggtgatg
ttgagttttccttggatcgcagttgattacctagcccgcacaaagataaggaatcgggga
tttggaagatttgattcaactaagccagttggttctctggcaaagtatctatcagaaagg
ttataa
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