Lotus japonicus: Lj3g3v2809850.1
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Entry
Lj3g3v2809850.1 CDS
T04348
Symbol
Lj3g3v2809850.1
Name
(Kazusa) -
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Pathway
lja03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
Lj3g3v2809850.1 (Lj3g3v2809850.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
Lj3g3v2809850.1 (Lj3g3v2809850.1)
03036 Chromosome and associated proteins [BR:
lja03036
]
Lj3g3v2809850.1 (Lj3g3v2809850.1)
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Lj3g3v2809850.1 (Lj3g3v2809850.1)
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Lj3g3v2809850.1 (Lj3g3v2809850.1)
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
Lj3g3v2809850.1 (Lj3g3v2809850.1)
Noncanonical PRC1 (PRC1.1)
Lj3g3v2809850.1 (Lj3g3v2809850.1)
Noncanonical PRC1 (PRC1.3/1.5)
Lj3g3v2809850.1 (Lj3g3v2809850.1)
Noncanonical PRC1 (PRC1.6)
Lj3g3v2809850.1 (Lj3g3v2809850.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-rbx1
zf-Nse
zf-RING_11
zf-C3HC4_5
zf-RING_6
zf-UDP
zf-RING_10
Motif
LinkDB
All DBs
AA seq
511 aa
AA seq
DB search
MPAQKRSLPDSGDDGDTSPPLLYHNRHAKQPPHRNPHLKAHGGQQQEQDEEDDDEDQQEE
DEEEDDEEEDGEEEEEEEDEEDAEEDEDEAGQRHNHDEDQSQDSDESPSSDSEEKPEFVY
VPVQDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS
LRDDPNYDALIASLYPDIEKYEEEELEFREEEKNRNKQIQASIAKIVQRQSEALVKRRRD
TPGAFAPRSQRNQRNIHSRRQNQVIDIQGSEDNEEENDNNEKDSSADDERCTEPPQRRRK
RWTRVRPSQPSSSMAGPDGGCVDSDIDVSRENRGTSRQVSKPRKLTWGRGGFRSNTRHGS
SGGSNSKSSRSGRLAKLVGHLRSLDENIDEFDVHLLLVSLDKSTPSLEQPHLCCRPTLTV
KHLYEYVARQTPLPVEAVEIMAVKGCCSTNRNESADDASALVCDELTTLAIDPHKDELEI
LQEHESLAEIRSKCISKRDHLILAYRQKEAL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgccggcacagaagcgctccctgcctgactccggcgacgatggggacacttcgccgccg
ctcctctatcacaaccgccatgccaagcaaccaccgcaccgcaacccacacttgaaagcc
cacggcggtcagcagcaggagcaagacgaggaggacgatgatgaagaccagcaggaggag
gatgaggaggaagacgacgaagaggaggatggagaggaagaggaagaggaggaggatgag
gaggatgctgaagaagatgaagatgaagctgggcaacgccataatcacgacgaggatcaa
tcacaggattccgacgaatctccatcttctgactctgaagaaaaacctgaatttgtgtat
gtaccagttcaggatatccgtaaagatgtccaatgtccaatttgccttggtattattaag
aaaacgagaactgttatggaatgcttgcaccggttttgcagggagtgcattgacaaatcg
atgcgactagggaataatgaatgccctgcttgccgcacacactgtgccagtcgtcgctct
ttgagagatgatccaaactacgatgcccttattgcttctttatatccagacattgagaag
tatgaggaagaggagcttgaatttcgtgaagaggagaagaaccgcaataagcagattcaa
gcttctatagcaaaaatagttcaacggcaatctgaagcactggttaagaggcgtagagat
acaccaggtgcatttgcaccaagatcacagcgtaatcaacggaacattcattctaggaga
cagaaccaagtgattgatattcaaggatctgaagataatgaggaggaaaatgacaacaat
gaaaaagactcatctgctgatgatgagcggtgcacagaacccccgcagagaaggcgaaag
agatggaccagagttcgtccctctcagccatcatcatctatggcaggtcctgatggtgga
tgtgtagacagtgatatagatgtaagtagagaaaatcgaggaacttcaaggcaggtgtca
aaacctagaaagcttacttggggaaggggtggttttaggagtaacacccgacatggcagt
agtggtggtagcaatagcaaaagttcccgcagtggtcgattggctaagctggttggtcat
cttagaagcttggatgaaaatattgatgagtttgatgtccatctcttgcttgtttccctg
gacaaaagtactccaagtttggagcagccacacctttgctgtcgaccaactttgactgtc
aagcacctttacgaatatgttgcccgtcagacacctttgccagttgaagcagtagagata
atggcagttaaaggatgctgcagtacaaatcgcaacgagtcagctgatgatgcttcagcc
ctggtttgtgatgagctaacaacgctggctatagatcctcacaaagatgaactggaaatt
ttgcaagaacatgaatccctggctgagattagatccaagtgcatatctaaaagggatcat
ttgattctggcatacaggcaaaaggaggcattatagtct
DBGET
integrated database retrieval system