Lactobacillus johnsonii N6.2: T285_05975
Help
Entry
T285_05975 CDS
T02941
Name
(GenBank) RNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ljn
Lactobacillus johnsonii N6.2
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ljn03009
]
T285_05975
Enzymes [BR:
ljn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
T285_05975
Ribosome biogenesis [BR:
ljn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
T285_05975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
ThiS
Motif
Other DBs
NCBI-ProteinID:
AHA97565
UniProt:
A0A7D9N6U3
LinkDB
All DBs
Position
complement(1238313..1239014)
Genome browser
AA seq
233 aa
AA seq
DB search
MRIDKYLANMNVGSRKEVHNLIKKKIVTVNGEVVKTPKEQVKEEDQVAVDGEKVAYQQYH
YFLLNKPKGVISATEDKSQKTVLSLLKPKDRYKDIAPVGRLDKDTTGLLLLTNDGALAHE
LLAPNKHVTKKYRARIAGVADEETVKVFASGMTLGDGTKLKPAELKILMQDKESDQSEIE
IEIQEGKYHQIKRMFGAVGMKVIELDRISMGKLVLPATLKRGQYQEITLKEIK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgataagtatttggctaacatgaatgttggttcacgtaaagaagttcataat
ctcattaaaaagaagattgtgacagttaatggagaagttgtaaagacaccgaaggagcaa
gttaaagaagaagaccaagtagcagttgatggagaaaaagtggcatatcagcaataccat
tattttcttctcaataaacctaaaggtgttatttcagcaacagaagataaaagtcaaaaa
actgttctttctttacttaaacctaaagatcgttataaagatatagcgccagtaggtaga
ctggataaggatacaacgggtttattattgttaacaaatgatggtgctttagcccatgag
ttgctagctcctaataaacatgttactaaaaaatatcgggcaagaattgctggagtagct
gatgaagagacagttaaagtttttgctagtggtatgacattaggtgatgggacaaaacta
aaaccagcagaattaaagattttgatgcaagataaagagtccgatcaatcagaaattgag
attgaaattcaagagggaaagtatcaccaaattaagcgaatgtttggagcagtggggatg
aaagtaatagaattagatagaatttctatgggaaaattagtcctaccagctactctaaaa
cgcggccaatatcaggaaattactctaaaagaaattaagtag
DBGET
integrated database retrieval system
