Leptospira kmetyi: EFP84_01905
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Entry
EFP84_01905 CDS
T05705
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
lkm
Leptospira kmetyi
Pathway
lkm02020
Two-component system
lkm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lkm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EFP84_01905 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EFP84_01905 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkm03021
]
EFP84_01905 (rpoN)
Transcription machinery [BR:
lkm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EFP84_01905 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4_2
Sigma70_r4
HTH_IclR
MarR
HTH_3
HTH_23
HTH_5
HTH_11
YqzH
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AYV54379
UniProt:
A0A2M9XMI6
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All DBs
Position
1:417175..418596
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AA seq
473 aa
AA seq
DB search
MNLSHSLVQKQTQKLVMTQDLRQSIELLPLSTLELSDRISSELVENPMLEEEYASERNRT
PDLYSRDDLRRKEKNDFIKNSDVTWQDNFSLDRAGSAGSDASDRNQKYIESSPEKSSLSE
HLLWQLRLSNLKPDEISIGEILISMLDDHGFITIPIPDLCAEMKLNEKKVRKVLDQINRL
DPIGIGAKDVQETLLIQAKILKPEDQKLHTLIRDHIKDLEKLDYKSVSKKMEISLEAVET
LASEIKKLEPYPATLYTPNKPDYVIPDVIVREVEGEFDIYINDEWIPRLKINKEYKNILK
NAKEADKEYINSKLGSAEWLIRSVNQRRQTLFKVTSAIIEMQTAFFQKGIQHIKPLTLKD
IAEKLEMHESTVSRITSNKYIQTSRGILELKWFFSSGVRSAEGGIESSKKIHDLIRNLVK
EEQSDNPLSDQEIVEAIGKQGIEIARRTVAKYRKILKILPSSQRKKVKSLESR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctcagtcactcactggttcaaaaacaaacccagaaactggtgatgacccaggac
ttaagacagtccatagaactcttacccttatccacgctcgaactttcggatcgaatcagc
tccgaactcgtggaaaatccgatgctcgaggaagaatacgcttccgaaagaaacagaact
cccgatctctacagcagagacgacctaagaagaaaagaaaagaacgactttatcaaaaac
tcggacgtcacctggcaggataatttctccttggaccgcgccggaagcgcgggctcggac
gcatccgatcgaaatcaaaaatacatcgaatcctctcccgaaaaaagttccttgtcggaa
catcttctttggcaactcaggctttcgaatctaaaacccgacgagatttccatcggcgaa
attctaatctccatgctcgacgatcacggatttatcacgattccgattccggatctttgc
gcggagatgaagttgaacgaaaaaaaagtccgcaaggttctcgatcaaatcaatagactc
gatccgatcggaatcggagccaaggacgttcaagaaacccttttgatccaggcgaagatt
ttaaagccggaagatcaaaaactgcatactctcatccgcgatcatatcaaggatctcgaa
aaactcgattacaaatccgtttccaaaaaaatggaaatctcgctcgaagcggtggaaaca
cttgcttccgaaatcaaaaaactcgaaccgtatccggccacgttatacacaccgaacaaa
ccagactacgtaatccccgacgtaatcgtacgagaagtcgagggagaattcgacatctac
atcaacgacgaatggattccacgcctcaaaatcaataaagaatataagaatattctaaaa
aacgcaaaggaagccgacaaggaatatatcaattctaaactgggatcggcggaatggttg
atccgttcggtgaaccaaagaagacaaaccctatttaaggtgacgtccgcaattatagaa
atgcagaccgcgttttttcaaaagggaatccaacacatcaaaccactcaccctcaaggac
atcgccgaaaaactggagatgcacgaatccaccgtttccagaatcacttcgaacaaatac
atacaaacctcgcgaggaattctcgagttaaaatggtttttttcatccggcgttcgctcc
gcggaaggtggaatcgaatcctccaaaaaaatccacgacctcatccgaaatctcgttaag
gaagaacaatccgacaatcctctttccgatcaggaaatcgtggaagcgatcggaaaacag
ggaatcgaaatcgcgagaagaaccgtcgccaaatacagaaagattctgaaaattcttccc
tcaagccaaagaaaaaaagtcaagtccttggagtcgagataa
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