Fructilactobacillus lindneri: AYR59_03695
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Entry
AYR59_03695 CDS
T04666
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lle
Fructilactobacillus lindneri
Pathway
lle03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AYR59_03695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lle03021
]
AYR59_03695
03400 DNA repair and recombination proteins [BR:
lle03400
]
AYR59_03695
Enzymes [BR:
lle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AYR59_03695
Transcription machinery [BR:
lle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AYR59_03695
DNA repair and recombination proteins [BR:
lle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AYR59_03695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ANZ59186
LinkDB
All DBs
Position
779260..782907
Genome browser
AA seq
1215 aa
AA seq
DB search
MVDVNKFKSMQVGLASPETIRSWSFGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWKC
ACGKYKGIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYYKGIPSRMGLVLDM
SPRALEEIIYFAAYVVTDPGNTPMEKKQLLTEQEYRDKKREYGNRFHAEIGAEAIRTLLD
DVDLDKEVKELKEELKKATGQKRTRAIRRLDILEAFLTSENKLSWMVMDAIPVMPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLHAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHLLKGKQGRFRQNLLGKRVDYSGRSVIDVGPWLKLSQMGLPVS
MALELFKPFIMHELVKRGLASNVKNAKREIERKDDVVFDVLPDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVSGKSMRLHPLVCAAYNADFDGDQMAIHVPLSDKAQAESRLLMAAAGHIL
APKDGKPVVAPSQDMVIGNYYLTMEEPGREGEGMIFNNPAEVELAYRDGLVHWHSRIGIP
ASAFPDKTFTDDQKDKIMVTSVGKVIFNGILPKEFTYLNEPTATNLHGYVPDKYFLKPGE
DIHEHIKNAELVKPFKKSFLSDIIAEVYNQYKVTETSELLDRIKDLGNDESTKSGLTVGM
SDITDLHEKPEIVAAAHKKVETVTKQFRRGLITDQERYERVVNVWNDARDEIQDKLMKTF
DPENPIFMMSNSGARGNISNFTQLAGMRGLMASPDGKIMELPITSNFREGMSVLEMFIST
HGARKGMIDTALKTANSGYLTRRLVDVSQDVIVREKDCETDRGLTVRAIKEGNEMIEPLY
DRILGRNAMKTVKNPQTGDVIVKRNQMIDDKKAQQIVDAGIDSVEIRSAFTCNTAHGVCE
MCYGQNLATGDEVGVGEAVGTVAAQSIGEPGTQLTLRTFHTGGVASNTDITQGLPRVQEI
FEARNPKGKSTISEVTGVVELIEEDPAEGVKEVTIQGKADTRKYKVPLNARMRVAEGDEV
RRGDALNEGSIDPKELLKIRDTLSTETYLLTAVQEVYRRQGVEVNDKHAEIMVRQMLRKV
RVMDPGDTDILPGTLIDIDDFKERNKDAVMTGKTPATARPVLLGITKAALETNSFLSAAS
FQETTRVLTDAAIRGKVDPLIGLKENVIIGKLLPAGIGVHEYEDIEPEEIGKPAGESVKT
DSEVVEESDNEKSSK
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgttaataaatttaaaagtatgcaggttggcttagcttcacctgaaaccatt
cgtagttggtcttttggagaagttaaaaaacctgaaacgattaactatcgaactttaaaa
ccagaaaaagatgggttgtttgacgaaagaatttttggtcctactaaggattggaaatgt
gcctgtggcaaatacaaaggtattcgttacaaaggcattgtgtgtgatcgttgtggagtt
gaagttacccgctcaaaagttcgtcgtgaacgaatgggacacatcgagttagctgctcca
gttactcatatttggtactacaaaggaattccaagtcgaatgggacttgtcttggacatg
agtccgcgagctttggaagagattatttactttgcagcatacgttgtaactgatccaggg
aacacccctatggaaaagaaacaattgttaacagaacaagaataccgtgataaaaaacgg
gaatatggcaatcgttttcacgctgaaatcggtgctgaagcaattcgaactctgttagac
gatgttgacttagataaagaagttaaagaattaaaagaagaattaaaaaaagctactggt
caaaagagaaccagagcaatccgtcgtttggatattttggaagcctttttaacttctgaa
aataaactttcatggatggtaatggacgcaattccagttatgccacctgatcttcgacca
atggtacaacttgaaggtggacgttttgctacttctgatttaaatgatttatatcgtcga
gtaattaatcgtaataatcgtttgaaacgtttattagatttacatgctcccggtattatt
gttcaaaatgaaaaacggatgttacaagaagcagttgatgcattgattgataatggtcgt
cgaggccgtccagttgctggaccaggtaaccgaccattgaaatctctttctcacttgcta
aaagggaagcaaggtcgtttcagacaaaacttgcttggtaaacgagttgattattcaggt
cggtcagttattgatgttggtccatggttaaaattaagccaaatggggttaccagtttca
atggcactagaattattcaaaccttttatcatgcacgaattagttaaacgtggattagca
tccaatgttaaaaatgctaagcgagaaatcgaacgtaaagatgatgttgtctttgatgtt
cttcctgatgttatcaaagaacaccctgttcttttaaaccgggcacctaccttgcataga
ttgggaattcaagcttttgaacctgttttagttagtggtaaatcaatgcgtttgcatcca
ttagtttgtgctgcatacaatgctgattttgatggagatcagatggctattcacgtgcca
ctttctgacaaagctcaagcagaatcgcgtctattgatggccgctgccggacatattttg
gcacccaaagatgggaagccggttgtggctccttcgcaggatatggttattggtaactat
tacttaacgatggaagaacccggtcgtgaaggtgaagggatgattttcaataatcctgct
gaagttgaattagcttaccgtgatggtttagttcattggcacagtcgaattggaattcct
gcctcagcctttccagacaaaacatttactgatgatcaaaaagacaaaattatggttacc
tcagttggtaaagtgatttttaatgggatcttgccaaaggaatttacttacctaaatgaa
ccaactgctactaacttgcatggttatgtacctgacaagtacttcttaaaacctggtgag
gatattcatgagcacattaagaatgctgaattagttaaaccatttaagaagagcttttta
tcagatattattgccgaagtttacaatcaatataaagttactgaaacatcagaattattg
gatcgaattaaagatcttggtaatgatgaatcaactaaatctggtttgacagttggaatg
tctgatattaccgacttacacgaaaaaccagaaattgtagctgctgctcataagaaagtt
gaaacagttactaaacaattccgtcgtggattaatcactgatcaagaacgttacgaacga
gttgtaaatgtttggaacgatgccagagatgaaattcaagataaactaatgaagactttt
gatcctgaaaacccaattttcatgatgagtaattctggagctcgtggtaatatttctaac
tttacccagcttgctggaatgcgtggattgatggcttctcctgatggtaagattatggaa
cttccaattacttctaatttccgtgaaggaatgtcagttttggaaatgttcatttcaacc
catggagctcgtaaaggtatgattgatacagccttgaagactgccaactcaggttacttg
actcgtcgtttagttgatgtttcacaagatgttattgttcgtgaaaaagactgtgaaact
gatcgtggtttgactgttcgtgccattaaagagggtaacgaaatgattgaaccgctttac
gatcgaattctaggcagaaatgcaatgaagacggttaagaatcctcaaactggtgatgta
atcgttaaacgtaatcaaatgattgatgataaaaaggcacaacaaattgttgatgctggg
attgacagtgttgaaattcgttctgccttcacttgtaatactgctcatggtgtttgcgaa
atgtgttatggtcaaaacttagcaactggtgatgaagttggtgttggtgaagcagttgga
acggttgctgctcaatcaattggtgaaccaggtactcagttaacattgcggactttccat
actggaggggttgcaagtaacaccgatattactcagggacttcctcgagttcaagaaatt
tttgaagctcgtaatcctaaaggtaaatcaaccattagtgaagttactggggtcgtagag
ttaattgaagaagatcctgctgaaggggttaaagaagttactattcaaggtaaagccgat
acaagaaagtataaggttcctttgaatgctcggatgagagttgctgaaggtgacgaagtt
cgacgtggtgatgccttgaatgaaggttcaattgatcctaaagagttgcttaaaattaga
gatactctttctactgaaacttacttgttaacggcggttcaagaagtttaccgtcgtcag
ggtgtggaagttaatgataagcatgctgaaatcatggttagacaaatgctgcgtaaagtt
cgggtaatggatcccggcgataccgatattttgcctggtactttgattgatattgatgat
ttcaaggaacgtaataaagacgctgttatgacgggtaaaaccccagcaacagcacgtcca
gtgttacttggaattaccaaagctgctcttgaaactaacagtttcttatcagcagcatct
ttccaagaaacaactagagttcttactgatgccgctattcgtggtaaagtagatccatta
attggtttgaaggaaaatgttatcattggtaaattgttacctgctggtattggggttcat
gaatatgaagacattgaaccagaagaaattggcaaacctgccggagagagcgtaaaaact
gactccgaagttgttgaagaatcagataacgagaaatcaagtaaataa
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