Fructilactobacillus lindneri: AYR59_06350
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Entry
AYR59_06350 CDS
T04666
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lle
Fructilactobacillus lindneri
Brite
KEGG Orthology (KO) [BR:
lle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lle03019
]
AYR59_06350
03009 Ribosome biogenesis [BR:
lle03009
]
AYR59_06350
Enzymes [BR:
lle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AYR59_06350
Messenger RNA biogenesis [BR:
lle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AYR59_06350
Ribosome biogenesis [BR:
lle03009
]
Prokaryotic type
rRNA helicases
AYR59_06350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
ANZ59652
LinkDB
All DBs
Position
complement(1254243..1255604)
Genome browser
AA seq
453 aa
AA seq
DB search
MSASFKDYHFQPFINDAIKDLGFENPTPIQSKVIPTIKHGKSVIGKSATGSGKTHAFLLP
LLDQLDPKNEKTQIVITTPSRELAYQIYDNVKQLVRFSPETIHIANYVGGTDKERQIEKL
EREQPQIVIGTPGRILDLTKGNHLDINTANKLVIDEADMTLDLGFLDVVDKIAAGMSKDL
QMMVFSATIPPKLKPFLKKYMKNPVLNDIPTASVINQDVDNWLISTKGQDKNSLIYKLLT
MGNPYLVLIFANTRERVDEIQEYLQVQGLKVAKIHGGMQPRVRKRVMKQIQNLDYQFVVA
SDLAARGIDIEGISQVINDDMPSDPEYFVHRVGRTGRNGMEGTAITLYGPDEEDKVSELE
KMGIKFKPKEIKNDEIVDSYDRKRRANYRGHHDKLDGSTLGMINKKKKNVKPGYKKKIKR
AIKMKDEKKHKIELRNQIRSKKKQKKRSSQRYR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcatttaaagattatcattttcaaccatttattaacgatgcaattaaagat
ttaggttttgaaaatcctactcccatccaatctaaagttattccaacgattaagcacggt
aaaagtgtgattggaaaatcagcaacaggtagtggtaagacccatgcgtttttattgcca
cttttagatcaacttgatcccaaaaatgaaaaaacacagattgtaattacaactcctagt
cgagaattggcctatcaaatttatgataatgtaaaacaacttgttagatttagtcctgaa
acaattcatattgctaattatgttggtggaactgataaagaacgacaaattgaaaaatta
gaacgagagcaaccacagattgtaattggaactccaggtcgaattttagacctaacaaag
ggtaatcatttagacattaatactgctaataagctagtgattgatgaagctgatatgacg
cttgatttaggttttttagatgtagttgataaaattgctgcaggaatgtccaaagattta
caaatgatggttttttctgcaacaattccaccaaaattaaagccatttttaaagaaatat
atgaaaaatcctgttttaaatgatattccaactgcttcagtaattaatcaagatgttgat
aattggttgatttctaccaaaggccaagataaaaatagtttaatttataaacttttaact
atgggaaatccatatttagttttaatttttgcaaacacccgtgagagagttgatgaaatt
caagagtacttacaagtccaagggttgaaagtagctaagattcatggtggcatgcagcca
cgtgttagaaaacgtgttatgaagcagattcaaaatttggattatcaatttgtggtagca
tctgatttggcggctcgagggattgatatcgaaggaatttctcaggttattaacgatgat
atgccatctgatccagaatattttgttcatcgagttggcagaacgggtagaaatggtatg
gaaggaacggctattactctttatggtcccgatgaagaagataaagtatcagaattagaa
aaaatgggaattaagtttaagcccaaagaaattaaaaatgatgagattgttgattcttat
gatcgtaaacgccgagctaattatcgtggtcaccatgataaacttgatggttctacactt
ggaatgattaataagaaaaagaaaaatgtaaaacctggttataaaaagaaaattaaacgt
gcaattaaaatgaaagatgaaaagaaacataagattgagcttagaaatcagattcgttct
aagaagaaacaaaagaagcgtagttcacaacgttaccgttga
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