Lactococcus lactis subsp. lactis IO-1: lilo_0451
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Entry
lilo_0451 CDS
T02485
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Pathway
lls03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
lilo_0451 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lls03400
]
lilo_0451 (uvrB)
DNA repair and recombination proteins [BR:
lls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lilo_0451 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
lilo_0451 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_16
AAA_5
AAA
Microtub_bd
AAA_7
PHP
DUF5595
Motif
Other DBs
NCBI-ProteinID:
BAL50452
LinkDB
All DBs
Position
488902..490980
Genome browser
AA seq
692 aa
AA seq
DB search
MAIERITDNKFELVSKYEPAGDQGEAIAELVDNIENGEKAQILRGATGTGKTYTMSQVIA
RTGKPTLVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSS
VNDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGSPKEYQDSVVSLRPGQEISRDQLLN
DLVGIQFERNDIDFQRGCFRVRGDVVEVFPASRDEHAFRVEFFGDEIDRIREIEVLTGQV
LGEVDHLAIFPATHFMTNDDRMEESIAKIEAELEEQLKVFRSEGKLLEAQRLEQRTNYDI
EMLREMGYCNGVENYSRHMDGREEGEPPYTLLDFFPDDFMIMIDESHMTMGQVKGMYNGD
RARKEMLCNYGFRLPSALDNRPLKREEFESHVHQIVYVSATPGDYEMEQTDTIVEQIIRP
TGLLDPVVEVRPMMGQIDDLVGEIHKRAEKNERVFVTTLTKKMSEDLTAYFKEMGIKVKY
MHSDIKTLERTEIIRDLRLGVFDVLVGINLLREGIDVPEVSLVAILDADKEGFLRNERGL
IQTIGRAARNSEGHVILYSDMAKALDENDAADKEILDSGYYTEYEGQKYKITRSMKHAMD
ETARRREIQMAYNEEHGITPQTIKKEIRDLIAITKKTDSGEIEEVDASAMTKKERKALVK
KLEKEMQQAASALDFEGAAQLRDMVLELRAMD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctatagaaagaataacagataataaatttgaacttgtttcaaaatatgagccagcc
ggtgaccaaggtgaggcgattgctgagttagtagataatattgagaatggggaaaaagct
caaattttacgtggagcaacaggaacagggaaaacttacaccatgagtcaagtgattgca
cggacaggtaaacctactcttgttatggctcataataaaacactggctggtcaattatac
agtgaatttaaagagttttttccaaataatgcagtcgagtatttcgtatcctactatgat
tattatcaacccgaagcctatgtgccaagttctgacacctatattgaaaaagacagttcg
gtcaatgatgaaattgataaattgcgtcatagtgcgacctcaagcttattggaacgtaat
gatgtgattgttgtggcctcagtttcttgtatttatggattgggttcacccaaagagtat
caagattcggtggtttcattgcgcccaggtcaagaaatttctcgtgaccaacttttaaat
gatttggtaggaattcaatttgagcgaaatgatattgactttcaacggggctgtttccga
gttcgtggggatgttgtagaagtttttccagcctctcgtgatgaacatgcctttcgtgtt
gaatttttcggtgatgaaattgaccgtatccgtgaaattgaagttttgaccggacaagtt
ttaggtgaagtggaccatttggcaattttcccagcgacacatttcatgacaaatgatgac
cgtatggaagaatcaattgccaagatagaagcagaattagaagaacaattaaaagttttc
cgctcagaaggaaaacttcttgaggctcaacgtttagaacaaagaaccaactacgatatc
gaaatgctccgtgaaatgggttattgtaatggggtcgaaaactattcacgtcatatggat
gggcgcgaggaaggcgaacctccttatactttgcttgatttctttcctgatgatttcatg
attatgattgatgaatcacacatgacaatggggcaagtaaaaggaatgtataacggtgac
agagcccgtaaagaaatgctttgtaattatggattccgcctgccttcagccctcgataac
cgtcctttaaaaagagaagaatttgaaagtcatgtgcatcaaattgtttatgtttcagca
acccctggggattatgagatggagcagaccgataccattgttgaacaaattattcgtcca
acaggtctattagatcctgtcgtagaagttcgaccaatgatgggacaaatcgatgattta
gttggtgaaattcataaacgagctgagaaaaacgaacgagtattcgtcacgactttgact
aaaaagatgtcagaagatttaactgcctattttaaggaaatggggataaaagttaaatat
atgcactcggatatcaaaacattagaacgaaccgaaattattcgggatttgcgtttagga
gtctttgatgttctggtgggaattaatttgcttcgtgaagggatagacgtgccagaagtt
tctttagtagcgattttggatgctgataaagaaggatttttacgtaatgagcgtggcttg
attcagaccattggtcgtgcagcacgtaatagtgaaggtcatgttattctttattctgat
atggctaaagcccttgatgaaaatgatgctgcggataaagaaatcttagatagtggttat
tatacagaatacgagggtcaaaagtataaaataacgcgttcaatgaaacatgcgatggat
gaaacagcccgccggcgtgaaattcaaatggcttataatgaagaacatggaatcacacct
caaacgatcaaaaaagaaattcgtgatttgattgccattactaagaaaactgattctggt
gagattgaagaagttgatgcaagtgcgatgactaagaaagaacgtaaagcattagtcaaa
aaacttgaaaaagaaatgcaacaagcggctagcgccctcgactttgaaggagctgctcag
ttacgtgatatggtattagaattacgtgcaatggattga
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