KEGG   Labilithrix luteola: AKJ09_09606Help
Entry
AKJ09_09606       CDS       T04033                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
llu  Labilithrix luteola
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:llu00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    AKJ09_09606
Enzymes [BR:llu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AKJ09_09606
DNA repair and recombination proteins [BR:llu03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AKJ09_09606
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
10130248..10132815
Genome map
AA seq 855 aa AA seqDB search
MARGDGDGTSRRRRRAPAPKRGSALRTYQELRDFESTSEPTAQIRPSATGRSFVVQQHAA
TAMHYDFRLELDGVLKSWAIPKGPSLSPTDKRLAVQTEDHPVDYRDFEGSIPEDQYGGGP
VIVWDRGEWQPKGNPDEGLQKGRLEFSLRGEKLHGAFVLVRMPDRQASPSRKKKDTWLLI
KRRDSFARDDGASSVVTRLPRSVLTDRTIEDIEAGAPALPKRTTSKEASTRARTAKMPRF
GAIEPQLATLVGAVPVAGPTTVGDWIYEIKYDGYRAITTLDHGEVQIASRNGKDWTSKFP
EIAEAVSRIRAKQAVFDGEIAYVLPDGRTDFQHLQNALGAAAKERAQIVYFVFDLLYFDG
VDLRDEPLITRKDTLRTILAYEKPPLRLADHVDERGETFFTHACKAGLEGIIAKRADRPH
VSGRGRDWVKVKCQKRQEFAIVGFTPPKGSRSGIGALLLAVHRGGRYQYAGKVGTGFTAR
TLQDLRKRLDKLTDGAKAPDGAPRMKDAVWVEPKLVGEVRFTEWTKDGVLRHPSFEGLRI
DKKPAEVVRETGDNRVLGITITHPERIVDRTLGLTKLDLARYHEAVAERLLAFAKKRPLM
LVRCTESWTADKLGPLQGTKAKRACFVQKHGGRGLTANIGHSDVEGEEVLYVQKPREVIE
LVQFNAIELHGWGSTLPRFDRPDWIVFDLDPDEALGFDKVVEAALALRASLGAIGLVSFV
KTTGGKGLHVVVPLNRRDGWEAVRTFAEDVARAFAEQASDKYVANMSKAKRRGKVFIDYL
RNAQGATAVLPYSPRARPGTPVAMPVAWNDLEHLDPRELDVFSVPKLLAKQKKDPWAGLL
QTSQSLGRAKRAKTK
NT seq 2568 nt NT seq  +upstreamnt  +downstreamnt
atggcgcgcggcgacggcgacgggacttcacgacgtcgccggcgcgcgcccgccccaaag
agaggttcggctctccgaacgtaccaagagctccgggacttcgagtccacgagcgagccc
accgcccaaattcgtccgtcggcgacgggtcgatcgttcgtcgtgcagcagcacgccgcg
acggccatgcattacgactttcggctggagctcgacggtgtgctgaagagctgggcgatc
cccaagggccccagcctctcgccgacggacaaaagactcgccgttcaaaccgaggatcac
ccggtcgactaccgagacttcgaaggctcgatccccgaagatcagtacggcggcgggccg
gtcatcgtctgggatcgcggcgaatggcagcccaagggcaacccggacgagggcctccaa
aaggggcgccttgagttttccctccgcggagagaagctccacggggccttcgtgctcgtg
cgcatgcccgaccgccaagcgagcccttcgcggaagaagaaagacacctggctgctcatc
aagcgccgcgattcgttcgctcgcgacgatggggcgagctcggtggtcacacgcttgccg
cgaagcgtcctcaccgatcgaaccatcgaagacatcgaagccggagcccccgccttgccc
aaacgaaccacgtcgaaggaagcatcgacgcgcgcccgtaccgccaagatgcctcgcttc
ggcgctatcgagccgcaactcgccacgctcgtgggcgcggtgcccgtcgctggaccgacc
acggtcggcgactggatctacgagatcaagtacgacggctatcgcgccatcacgacgctc
gatcacggcgaggtccagatcgcctcacgcaacggcaaggattggacctccaagttcccc
gagatcgccgaggccgtgtcgcgcatccgcgcgaagcaggccgtgttcgacggcgagatt
gcctacgtcttgccggacggacgcaccgacttccagcacctgcagaacgcgctcggtgca
gccgcgaaggagcgcgcgcagatcgtctacttcgtcttcgacctgctctacttcgacggt
gtcgatctccgcgacgaaccgctgatcacacgcaaggatacgctccgcaccatcctcgcg
tacgagaagccgccgctgcggctcgccgatcacgtggacgagcgcggcgaaacgttcttc
acccacgcctgcaaggccgggctcgagggcatcatcgccaagcgcgccgatcgcccgcac
gtgagcggacgcgggcgcgattgggtgaaggtgaagtgccagaagcgacaagagttcgcc
atcgtcggcttcacgcccccgaaggggtcacgcagcggcatcggcgcgctgcttctcgcc
gtgcaccgcggaggccggtaccagtacgccggcaaggtcggcacgggcttcaccgcccgg
acgctccaggatctgcgcaagcgcctcgacaagctcaccgacggcgccaaagcccccgat
ggggccccgcgcatgaaagacgcggtttgggtcgagccgaagctcgtcggcgaagtccgg
ttcaccgagtggaccaaggatggagtccttcgccatccctcgttcgaaggacttcgcatc
gacaagaaacctgccgaggtcgtgcgcgagacgggcgacaaccgcgtgctcggcatcacc
atcacgcatcccgaacgcatcgtcgaccgcacgctcggcctgacgaaactcgatctcgcg
cgctaccacgaggccgtggcggagcgcctgctcgccttcgccaagaagcggccgctcatg
ttggtgcgctgcacggaatcgtggaccgccgacaagctcggcccgctccagggtacgaaa
gccaagcgagcctgcttcgtccagaagcacggaggtcgagggctcaccgcgaacatcggc
cactccgacgtcgaaggcgaggaagtgctctacgtgcagaaacctcgcgaggtgatcgag
ctcgtccagttcaacgccatcgagctccacggatggggttccacgctcccgcgcttcgat
cgtcccgattggatcgtgttcgatctcgatccggacgaagccctcgggttcgacaaggtc
gtcgaagcggccctcgccctccgcgcttcgctcggcgcgatcgggctcgtgagcttcgtc
aagacgacgggcggcaaaggcctgcacgtcgtcgtgcctctgaatcgtcgcgatggttgg
gaagccgtgcgcacgttcgccgaagacgtcgcccgggcgttcgccgagcaagcgtcggac
aagtacgtcgccaacatgtccaaggcgaagcgtcgggggaaggtcttcatcgactacctg
cgaaacgcgcaaggcgcgaccgcggtgcttccctattcgcctcgcgcccgcccgggtacc
ccggtggcgatgccggtggcctggaacgatctcgagcacctcgatccacgcgagctcgac
gtgttctcggtgcccaagctcctcgccaagcagaagaaagatccgtgggccggccttctc
cagacctcccagtcgctcgggcgagccaagcgcgccaagacaaaatga

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