Lutra lutra (Eurasian river otter): 125088864
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Entry
125088864 CDS
T08100
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04142
Lysosome
llv04144
Endocytosis
llv04721
Synaptic vesicle cycle
llv04961
Endocrine and other factor-regulated calcium reabsorption
llv05016
Huntington disease
llv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125088864
04142 Lysosome
125088864
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
125088864
09156 Nervous system
04721 Synaptic vesicle cycle
125088864
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125088864
09164 Neurodegenerative disease
05016 Huntington disease
125088864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125088864
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
llv04147
]
125088864
Membrane trafficking [BR:
llv04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
125088864
Exosome [BR:
llv04147
]
Exosomal proteins
Proteins found in most exosomes
125088864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
TPR_1
Motif
Other DBs
NCBI-GeneID:
125088864
NCBI-ProteinID:
XP_047566395
LinkDB
All DBs
Position
17:55839103..55845226
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAIFNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagctccagaacctgggtata
aatccagcaaacattggcttcagtaccctaactatggagtcagacaaattcatctgcatt
agagagaaagtaggagagcaggcccaggtggtaatcattgacatgaatgacccaagtaat
ccaattcgaaggccaatttctgcagacagcgccatcatgaatccagctagcaaagtaatt
gcattgaaagctgggaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcccataccatgactgatgatgtcaccttctggaaatggatctctttgaatacggttgct
cttgttacggataatgcagtttatcattggagtatggaaggagagtctcagccagtgaaa
atgtttgatcgccattctagccttgcagggtgtcagattatcaattatcgtacagatgca
aagcaaaagtggttacttctgactggcatatctgcacagcaaaatcgtgtggtgggagct
atgcagttgtattctgtagataggaaagtgtctcagcccattgaaggacatgcggctagc
tttgcgcagtttaaaatggaaggaaatgcagaagaatcaacgttattttgtttcgcagta
cggggtcaagctggagggaagttacatatcattgaagttggcacaccacctacaggaaac
cagccctttccaaagaaggcagtggatgttttcttccctccagaagcacaaaatgacttt
cctgttgcaatgcagattagtgaaaagcatgatgtagtgtttttaattactaagtatggc
tatatccacctctatgatcttgagactggtacctgtatctacatgaatagaatcagtgga
gaaacgatctttgttactgcacctcatgaagctacagctggaataattggagtcaacaga
aagggacaagttctgtcagtatgtgtggaagaagaaaacataattccttatatcaccaat
gtcctacaaaatcctgatttggctctgagaatggctgtacgtaacaacttagctggtgct
gaagaactctttgcccggaaatttaatgctctttttgcccagggaaattactcagaggca
gcaaaggtagctgccaatgcaccaaagggaatccttcgtaccccagacactatccgtcgg
ttccagagtgtcccagcccagccaggtcaaacttctcctctacttcagtactttggaatt
cttttggaccagggtcagctaaacaaatacgaatccttagaactgtgtaggcctgtactt
cagcaaggacggaaacagcttttggagaaatggttaaaagaagataagctggaatgctca
gaagaactgggtgaccttgtgaaatctgtggaccctactttggcacttagtgtgtatctg
cgggctaatgtcccaaataaagtcattcagtgctttgcagaaacaggtcaagtccagaag
attgttttatatgcgaaaaaagttggatatactccagactggatatttttgctgaggaat
gtcatgcgtatcagtccagatcagggacagcagtttgcccaaatgttagttcaggatgaa
gaacctcttgctgatatcacacagattgtggatgtctttatggaatacaatctaattcag
cagtgtacagcattcttgcttgatgccctgaagaataaccgcccatctgaaggtccttta
cagacacggttgcttgagatgaaccttatgcatgcgcctcaagttgcagatgctattcta
gggaatcagatgttcacgcattatgaccgggctcatattgctcagctgtgtgaaaaggct
ggtctgctgcagcgtgcattagaacacttcactgatttatatgacataaagcgtgcggtt
gttcacactcatcttcttaaccctgagtggttagtgaattactttgggtccttatcagtg
gaagactccctagaatgcctcagggccatgctgtctgccaatattcgtcaaaatctgcag
atttgtgttcaggtggcttcgaaatatcatgagcaactgtcaactcagtctctgattgaa
ctttttgaatctttcaagagttttgaaggtctcttttattttctgggatccattgttaac
tttagtcaggacccagatgtgcactttaagtatattcaggcagcttgcaagactgggcag
atcaaagaagtagaaagaatctgcagagaaagcaactgctatgatcctgagcgagtcaag
aattttctcaaggaagcaaagctaacagatcagttaccacttatcattgtatgtgatcga
tttgactttgtccatgatttggtgctctatttatatagaaataatcttcaaaagtatata
gagatatatgtacagaaggtgaatccaagtcgacttcctgtggttattggaggattgctt
gatgttgattgctctgaagatgtcattaaaaatttaattcttgttgtaagaggtcaattc
tctactgatgagcttgttgctgaggttgaaaaaagaaacagattgaaactgcttctgcct
tggctagaggccagaattcatgagggctgtgaggagcctgctactcacaatgcattagcc
aaaatctacatagacagtaataacaacccagagagatttcttcgtgaaaatccttattat
gacagtcgcgttgttggaaaatattgtgagaagagagatccacatctggcctgtgttgct
tatgaacgtggccagtgtgatctggaacttattaatgtttgtaatgagaattccctcttc
aaaagtctttcccgctatttggtacgccgaaaggatccagaattatggggtagtgtgctg
ctggaaagcaatccttacaggagacccctaattgaccaggttgtacagacagccttgtct
gagactcaggaccctgaagaagtgtcagtaactgtcaaggcttttatgactgcagacctt
cctaatgaactcattgaactcctggagaaaattgtccttgataactctgtattcagtgaa
cacaggaatctgcaaaacctcctcatcctcactgcaatcaaggctgaccgtacacgtgtt
atggagtatattaatcgcctggataattatgatgccccagatattgccaatattgccatc
ttcaatgagctgtttgaagaagcatttgccattttccggaaatttgatgtcaatacttca
gcagttcaggtcttgattgaacatattggaaatttggatcgggcatatgagtttgctgaa
cgctgcaatgaacctgcagtctggagtcagcttgcaaaagcccagttgcagaaaggaatg
gtgaaggaagccattgattcatatatcaaagcagatgatccttcatcctacatggaagtt
gttcaagctgccaatactagtggaaactgggaagaactagtgaagtacttgcagatggcc
cgtaagaaggctcgtgagtcctatgtggagacagaattgatatttgccctggctaaaaca
aatcgccttgcagagttagaagaattcatcaatgggccaaataatgctcatatccaacaa
gttggtgaccgttgttatgatgaaaagatgtatgatgctgctaaactattgtataataat
gtttccaattttggacgcttggcatctaccctggttcatctgggtgaatatcaggcagct
gttgatggagctaggaaagctaacagtactcgaacatggaaagaggtctgcttcgcctgt
gtagatggcaaggagtttcgtcttgctcagatgtgtgggcttcatatagtagtacatgca
gatgaattggaggaacttatcaactactatcaggatcgaggctactttgaagaactgata
accatgttggaagcagcgctgggacttgagcgagctcatatgggaatgtttaccgaatta
gctattctatattctaaatttaagccacagaaaatgagggagcacctggagctgttctgg
tccagagtgaatattcctaaggtgctgagagctgcagaacaagctcatctttgggcagaa
ctggtgtttttgtatgacaagtacgaagaatatgataatgccataattactatgatgaac
catccaactgatgcatggaaggaagggcagttcaaagatatcattaccaaggttgccaat
gtagaactatactacagagcaatacagttctacttagaattcaagcctctgttgctaaat
gatttgctgatggtgctgtctccacggttggatcatactcgtgctgtcaattatttcagc
aaggttaaacagctaccgctggtgaaaccatatttgcgttcagttcaaaaccacaataac
aaatctgtgaatgaatcactgaacaacctcttcattacagaagaagattatcaggctctg
cgaacatcaatagatgcttatgacaactttgacaatatctcacttgctcaacgtttggaa
aaacatgaactcattgagttcagaagaattgctgcttatctcttcaaaggcaacaatcgt
tggaaacagagtgtagagctgtgcaagaaagatagcctgtacaaggatgcaatgcagtat
gcctctgagtctaaagatacggagttggctgaagaactcctacagtggtttttgcaggaa
gaaaaaagagagtgctttggagcttgtctttttacctgttatgatcttttaaggccagat
gttgtcctggaaactgcatggaggcacaatatcatggattttgccatgccctatttcatc
caggtcatgaaggaatacttgacaaaggtggataaattagatgcttcagagtcactgaga
aaagaagaagaacaagctacagagacgcaacctattgtttatggtcagccccagttgatg
ctgacagcgggacccagtgttgcagtccctccccaggcaccttttggctatggttatact
gcaccaccctatgggcagccacagcctggctttgggtacagcatgtga
DBGET
integrated database retrieval system