Lutra lutra (Eurasian river otter): 125097832
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Entry
125097832 CDS
T08100
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
llv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125097832
03015 mRNA surveillance pathway
125097832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125097832
03041 Spliceosome [BR:
llv03041
]
125097832
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125097832
Spliceosome [BR:
llv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
125097832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
ETRAMP
Motif
Other DBs
NCBI-GeneID:
125097832
NCBI-ProteinID:
XP_047581866
LinkDB
All DBs
Position
4:complement(179649170..179680681)
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AA seq
923 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS
PVTKRRSPSLSSKHRKGSSPSRSTREPRSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS
SPQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPA
PQSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAVAAAAAAAAAAAAVTPAAPTAPTTTSAQEEPEAEPEPKKETESEPEDNLD
DLEKHLREKALRSMRKAQVSPQS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaataaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctcctcttaagtgcacaagaaaacatcgctggaatccct
tctgcttttctagaactgaagaaagaagaaataaaacagagacaaattgaacaagaaaag
ttggcttctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggagaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaaacctgaacctgtaccagagcctaaagaaccttct
ccagagaaaaattccaaaaaagaaaaggagaaggagaagacccgaccaagatctcggtca
cgttccaaatcaagatcccggacacggtctcgctctccttctcatactcgacctagacga
cgtcatagatcccgatcaagatcatactcacctagaaggaggccaagtccgagaaggcgg
ccatctcctcgaagaagaaccccaccaagacgaatgccacctccacccaggcatagaagg
agtagatctccagtgagacgaagaaggcgttcatcagcatccttgtctggaagtagctca
tcgtcctcttcgtctcgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcgaaaaactcgtaggttatctccttcagcgagtcctcccaggcgaaggcatagg
ccatcacctccagcaactccaccgccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgaca
aaacataaaggtactgagaaaagagagtccccttcaccagcacctaagcctagaaaagta
gagttatctgaatcagaagaagataaaggtggcaaaatggctgcggcagattctgtgcag
cagagacgtcaatacagacgacagaaccagcagtcttcatctgattctggctcctcttct
tcctcagaagatgagcgacccaagaggtcccatgtgaagaatggtgaggtaggcaggcgg
cggagacattctccttcccggagtgcctctccatcacctcgaaagcgccagaaggagact
tcccctcggatgcaaatgggaaagcgatggcaatcgccagtgactaaaagtggtagacgg
aggaggagtccctctccaccacccaccagaaggcgacgttctccttctcctgcccctcct
cctcgtaggcgcaggtctcccacgccgccaccacgacgaaggactccttctcctccaccc
cgccggcgctcaccttctccaagaagatactctcctcctatacagaggagatactctcct
tccccgcctccgaagagaagaacagcttctccccctccccctcctaaacgaagggcatca
ccatctccaccaccaaagcgtcgggtctcccattctccacctcccaaacaaagaagctcc
ccagtcaccaagagacgttcaccttcattatcatcaaagcataggaaagggtcttccccg
agccggtctacgcgtgaaccccggtcaccacaaccaaacaaaaggcattcgccctcacca
cggcctcgagctcctcaaacctcctcaagccctccacctgttcgaagaggagcgtcgtca
tcaccccaaagaaggcagtccccttctccaagtactaggcccattaggagagtctccagg
actccggaacccaaaaagacaaaaaaggctgcctcaccaagccctcagtctgtaaggagg
gtctcgtcctcccgatctgtctcaggatctcctgagccagcagctaaaaagcccccagca
cctcagtctcctgtccagtcccagtccccctcaaccaactggtcaccagcggtaccggtc
aaaaaggctaaaagcccaacaccaagcccatctccagcgaggaactcagacccagaagga
ggtggaaagaagaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaag
aaacacaaaaaacacaagaaggaaaaggccgtggcggcagccgcagcagcagcagcagca
gcagcagctgtcacccctgcggcccccactgcccccacgaccacatcagcacaggaggaa
ccggaggcagagcccgagcctaagaaggagaccgaaagcgagcctgaagacaacctcgac
gacttagaaaagcacctgcgtgaaaaggcgctgagatcgatgcggaaggctcaagtgtcc
ccacagtcttag
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