KEGG   Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_1055
Entry
NCDO2118_1055     CDS       T03437                                 
Symbol
rluD
Name
(GenBank) Pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
llx  Lactococcus lactis subsp. lactis NCDO 2118
Brite
KEGG Orthology (KO) [BR:llx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:llx03009]
    NCDO2118_1055 (rluD)
Enzymes [BR:llx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     NCDO2118_1055 (rluD)
Ribosome biogenesis [BR:llx03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    NCDO2118_1055 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF2111
Other DBs
NCBI-ProteinID: AII12540
LinkDB
Position
1099364..1100269
AA seq 301 aa
MPIIKINEENKGLRLDKALANQTEYSRSLLTELIKNDKVFVNSEAKKAKYKVKVGDRIEF
EVPEAEVLDIVAEDLPLEIIYEDSDVAVVNKPQGMVVHPAAGHASGTLVNAIMYHIKDLS
SINGVIRPGIVHRIDKDTSGLLMIAKNDKAHESLAAQLKDKTSKRRYLAIVHGEIANDKG
TIEAPIGRNLKDRKKQAVVSGGKPAVTHFEVLERFYGYTLIALRLETGRTHQIRVHMNYI
GHPVAGDPLYGPNKTLTPNKGQFLHAETLGFDHPTTGEFMEFQVDAPEIFNEQLEKLREQ
V
NT seq 906 nt   +upstreamnt  +downstreamnt
ttgcctatcataaaaattaacgaagaaaacaaaggcttacgtcttgacaaggcgcttgcc
aatcaaacagaatattcacgaagtttactgacagaacttatcaaaaatgataaagtgttt
gttaacagtgaagccaaaaaagcaaagtataaagtaaaagtaggggacaggattgaattt
gaagttccggaagcggaagttcttgatattgttgctgaagatttgccactagaaatcatt
tatgaagattcagatgttgcagtagtaaataaacctcaaggaatggtagttcatcctgca
gccggtcatgcttcagggacattggttaatgcaatcatgtatcatatcaaagatctttca
agcattaatggtgtaattcgtccaggaattgtgcatcgtattgataaggatacgagtggt
cttttgatgattgccaaaaatgataaagcacacgaaagtttggcagcacaattaaaagat
aagactagcaaacgtcgttatttagcgattgtccacggtgaaattgctaatgataaagga
accattgaagcgccaattggacgtaatcttaaagatcgcaaaaaacaagccgtagtttct
ggcggaaaaccagccgtgactcattttgaggttttagaacgattttatggctatactttg
attgcattgcgcttggaaactgggcgtacacatcagattcgtgtacatatgaattacatt
ggtcatcctgtggctggtgatccactctatgggccaaataaaacattgacacctaataaa
gggcaatttttgcatgctgaaacattaggttttgaccatccaacaactggtgagtttatg
gaattccaagttgatgctcctgagatattcaatgaacaattagaaaagcttagagaacaa
gtttaa

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